4IL6
Structure of sr-substituted photosystem ii
PDB DOI: 10.2210/pdb4il6/pdb
Classification: ELECTRON TRANSPORT Organism(s): Thiobacillus Thioparus , Streptomyces Roseoverticillatus
Deposited: 2012-12-29 Deposition Author(s): Kamiya, N. , Kawakami, K. , Koua, F.H.M. , Shen, J.R. , Umena, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.1 Å
Structure of sr-substituted photosystem ii
Kamiya, N. , Kawakami, K. , Koua, F.H.M. , Shen, J.R. , Umena, Y.
Primary Citation of Related Structures: 4IL6
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem Q(B) protein | A | 334 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | ANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDIDGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFLLGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFAALGISTMAFNLNGFNFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLA |
| Photosystem II reaction center protein K | K | 37 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | KLPEAYAIFDPLVDVLPVIPVLFLALAFVWQAAVGFR |
| Photosystem II reaction center protein L | L | 37 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | MEPNPNRQPVELNRTSLYLGLLLILVLALLFSSYFFN |
| Photosystem II reaction center protein M | M | 34 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | MEVNQLGLIATALFVLVPSVFLIILYVQTESQQK |
| Photosystem II manganese-stabilizing polypeptide | O | 244 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALPQAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIEPA |
| Photosystem II reaction center protein T | T | 31 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | METITYVFIFACIIALFFFAIFFREPPRITK |
| Photosystem II 12 kDa extrinsic protein | U | 97 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | ELVNVVDEKLGTAYGEKIDLNNTNIAAFIQYRGLYPTLAKLIVKNAPYESVEDVLNIPGLTERQKQILRENLEHFTVTEVETALVEGGDRYNNGLYK |
| Cytochrome c-550 | V | 137 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | AELTPEVLTVPLNSEGKTITLTEKQYLEGKRLFQYACASCHVGGITKTNPSLDLRTETLALATPPRDNIEGLVDYMKNPTTYDGEQEIAEVHPSLRSADIFPKMRNLTEKDLVAIAGHILVEPKILGDKWGGGKVYY |
| Photosystem II reaction center protein ycf12 | Y | 30 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | EVIAQLTMIAMIGIAGPMIIFLLAVRRGNL |
| Photosystem II reaction center protein X | X | 40 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | TITPSLKGFFIGLLSGAVVLGLTFAVLIAISQIDKVQRSL |
| Photosystem II reaction center protein Z | Z | 62 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLIFLGSGLWIALVLVVGVLNFFVV |
| Photosystem II core light harvesting protein | B | 505 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYELATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSITGETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLELFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGLFGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAHHIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQQEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAKGGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPAFFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSFYGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDGIFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSGIDPELSPEQVEWGFYQKVGDVTTRK |
| Photosystem II protein Y | R | 34 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | DWRVLVVLLPVLLAAGWAVRNILPYAVKQVQKLL |
| Photosystem II CP43 protein | C | 451 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | ATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPFFVVGVVHLISSAVLGFGGVYHAIRGPETLEEYSSFFGYDWKDKNKMTTILGFHLIVLGIGALLLVAKAMFFGGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEGWIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIWSGEAYLSYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTGPEASQAQAMTFLIRDQKLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSPRSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPVLSMPSLD |
| Photosystem II D2 protein | D | 342 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | ERGWFDILDDWLKRDRFVFVGWSGILLFPCAYLALGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGVRPYNAIAFSAPIAVFVSVFLIYPLGQSSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGNAL |
| Cytochrome b559 subunit alpha | E | 80 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | TTGERPFSDIITSVRYWVIHSITIPALFIAGWLFVSTGLAYDVFGTPRPDSYYAQEQRSIPLVTDRFEAKQQVETFLEQL |
| Cytochrome b559 subunit beta | F | 34 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | SYPIFTVRWVAVHTLAVPTIFFLGAIAAMQFIQR |
| Photosystem II reaction center protein H | H | 63 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | ARRTWLGDILRPLNSEYGKVAPGWGTTPLMAVFMGLFLVFLLIILEIYNSTLILDGVNVSWKA |
| Photosystem II reaction center protein I | I | 36 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | METLKITVYIVVTFFVLLFVFGFLSGDPARNPKRKD |
| Photosystem II reaction center protein J | J | 37 | Thiobacillus Thioparus , Streptomyces Roseoverticillatus | EGGRIPLWIVATVAGMGVIVIVGLFFYGAYAGLGSSL |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-12-29 Deposition Author(s): Kamiya, N. , Kawakami, K. , Koua, F.H.M. , Shen, J.R. , Umena, Y.