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4I3S

Crystal structure of the outer domain of hiv-1 gp120 in complex with vrc-pg04 space group p21

PDB DOI: 10.2210/pdb4i3s/pdb

Classification: Viral Protein/Immune System
Organism(s): Homo Sapiens , Human Immunodeficiency Virus

Deposited: 2012-11-26
Deposition Author(s): Biertumpfel, C. , Joyce, M.G. , Kwong, P.D. , Nabel, G.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å

Literature

Crystal structure of the outer domain of hiv-1 gp120 in complex with vrc-pg04 space group p21

Biertumpfel, C. , Joyce, M.G. , Kwong, P.D. , Nabel, G.J.

Primary Citation of Related Structures: 4I3S


Proteins
Molecule Chains Sequence Length Organism Sequence
Outer domain of HIV-1 gp120 (KER2018 OD4.2.2) G 190 Homo Sapiens , Human Immunodeficiency Virus KPVVSTQLLLNGSLAEKEIRIKSEDISDNAKNIIVQLTKPVLINCARPSNNTQYCVVNRTQWNDTLGQVAIQLRKHWNTCIIFNEPSGGDLEITTHSFNCGGEFFYCNTSDLFNSTWNIEGTASIDGTESNDDITLPCRIKGSGAPPIQGVIRCQSNITGILLTRDGGSGSGTCETFRPGGGDMRDNWRS
Heavy chain of VRC-PG04 Fab H 228 Homo Sapiens , Human Immunodeficiency Virus QVQLVQSGSGVKKPGASVRVSCWTSEDIFERTELIHWVRQAPGQGLEWIGWVKTVTGAVNFGSPDFRQRVSLTRDRDLFTAHMDIRGLTQGDTATYFCARQKFYTGGQGWYFDLWGRGTLIVVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Light chain of VRC-PG04 Fab L 208 Homo Sapiens , Human Immunodeficiency Virus EIVLTQSPGTLSLSPGETASLSCTAASYGHMTWYQKKPGQPPKLLIFATSKRASGIPDRFSGSQFGKQYTLTITRMEPEDFARYYCQQLEFFGQGTRLEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-11-26
Deposition Author(s): Biertumpfel, C. , Joyce, M.G. , Kwong, P.D. , Nabel, G.J.