4GQH
The conformations and interactions of the four-layer aggregate revealed by x-ray crystallography diffraction implied the importance of peptides at opposite ends in their assemblies
PDB DOI: 10.2210/pdb4gqh/pdb
Classification: VIRAL PROTEIN Organism(s): Tobacco Mosaic Virus
Deposited: 2012-08-23 Deposition Author(s): Chen, X. , Chen, Z. , Hu, D.Y. , Jin, L.H. , Li, X.Y. , Song, B.A. , Wang, Z.C. , Yang, S. , Yu, D.D. , Zeng, M.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.06 Å
The conformations and interactions of the four-layer aggregate revealed by x-ray crystallography diffraction implied the importance of peptides at opposite ends in their assemblies
Chen, X. , Chen, Z. , Hu, D.Y. , Jin, L.H. , Li, X.Y. , Song, B.A. , Wang, Z.C. , Yang, S. , Yu, D.D. , Zeng, M.J.
Primary Citation of Related Structures: 4GQH
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Capsid protein | A | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | B | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | C | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | D | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | E | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | F | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | G | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | H | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | I | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | J | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | K | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | L | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | M | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | N | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | O | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | P | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | Q | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | R | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | S | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | T | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | U | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | V | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | W | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | X | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | Y | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
| Capsid protein | Z | 174 | Tobacco Mosaic Virus | MGSSHHHHHHSSGLVPRGSHSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-08-23 Deposition Author(s): Chen, X. , Chen, Z. , Hu, D.Y. , Jin, L.H. , Li, X.Y. , Song, B.A. , Wang, Z.C. , Yang, S. , Yu, D.D. , Zeng, M.J.