4GC7
Crystal structure of dpo4 in complex with s-mc-dadp opposite dt
PDB DOI: 10.2210/pdb4gc7/pdb
Classification: TRANSFERASE/RNA Organism(s): Sulfolobus Solfataricus P2 , Synthetic Construct
Deposited: 2012-07-29 Deposition Author(s): Banerjee, S. , Eoff, R.L. , Ketkar, A. , Zafar, M.K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.89 Å
Crystal structure of dpo4 in complex with s-mc-dadp opposite dt
Banerjee, S. , Eoff, R.L. , Ketkar, A. , Zafar, M.K.
Primary Citation of Related Structures: 4GC7
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase IV | A | 359 | Sulfolobus Solfataricus P2 , Synthetic Construct | HHHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT |
| DNA polymerase IV | B | 359 | Sulfolobus Solfataricus P2 , Synthetic Construct | HHHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*G*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3') | c | 14 | NA | GGGGGAAGGATTCC |
| DNA (5'-D(*G*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3') | e | 14 | NA | GGGGGAAGGATTCC |
| DNA (5'-D(*TP*CP*AP*TP*GP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') | d | 18 | NA | TCATGGAATCCTTCCCCC |
| DNA (5'-D(*TP*CP*AP*TP*GP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') | f | 18 | NA | TCATGGAATCCTTCCCCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-07-29 Deposition Author(s): Banerjee, S. , Eoff, R.L. , Ketkar, A. , Zafar, M.K.