PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4FO6

Crystal structure of the pre-catalytic ternary complex of polymerase lambda with a datp analog opposite a templating t and an rcmp at the primer terminus.

PDB DOI: 10.2210/pdb4fo6/pdb

Classification: TRANSFERASE, LYASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2012-06-20
Deposition Author(s): Bebenek, K. , Gosavi, R.A. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.007 Å

4fo6
Literature

Crystal structure of the pre-catalytic ternary complex of polymerase lambda with a datp analog opposite a templating t and an rcmp at the primer terminus.

Bebenek, K. , Gosavi, R.A. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C.

Primary Citation of Related Structures: 4FO6


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase lambda A 329 Homo Sapiens , Synthetic Construct AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVKGETKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*GP*GP*CP*TP*GP*TP*AP*CP*TP*G)-3' t 11 NA CGGCTGTACTG
5'-D(*CP*AP*GP*TP*AP)-R(P*C)-3' p 6 NA CAGTAC
5'-D(P*GP*CP*CP*G)-3' d 4 NA GCCG
5'-D(P*TP*AP*CP*TP*G)-3' h 5 NA TACTG
5'-D(P*CP*AP*GP*TP*A)-3' i 5 NA CAGTA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-06-20
Deposition Author(s): Bebenek, K. , Gosavi, R.A. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C.