4FFZ
Crystal structure of denv1-e111 fab fragment bound to denv-1 diii (western pacific-74 strain).
PDB DOI: 10.2210/pdb4ffz/pdb
Classification: IMMUNE SYSTEM/VIRAL PROTEIN Organism(s): Dengue Virus 1 , Mus Musculus
Deposited: 2012-06-01 Deposition Author(s): Austin, S.K. , Center For Structural Genomics Of Infectious Diseases (Csgid) , Fremont, D.H. , Nelson, C.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.8 Å
Crystal structure of denv1-e111 fab fragment bound to denv-1 diii (western pacific-74 strain).
Austin, S.K. , Center For Structural Genomics Of Infectious Diseases (Csgid) , Fremont, D.H. , Nelson, C.A.
Primary Citation of Related Structures: 4FFZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Envelope protein E | A | 111 | Dengue Virus 1 , Mus Musculus | MASMTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSSQDEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVVGAGEKALKLSWFKKGSSIG |
| Envelope protein E | X | 111 | Dengue Virus 1 , Mus Musculus | MASMTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSSQDEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVVGAGEKALKLSWFKKGSSIG |
| DENV1-E111 fab fragment (light chain) | L | 216 | Dengue Virus 1 , Mus Musculus | NIVLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN |
| DENV1-E111 fab fragment (light chain) | Y | 216 | Dengue Virus 1 , Mus Musculus | NIVLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN |
| DENV1-E111 fab fragment (heavy chain) | H | 217 | Dengue Virus 1 , Mus Musculus | QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAYMQLSSLTSEDSAIYYCARWFFPWYFDVWGTGTTVTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIES |
| DENV1-E111 fab fragment (heavy chain) | Z | 217 | Dengue Virus 1 , Mus Musculus | QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAYMQLSSLTSEDSAIYYCARWFFPWYFDVWGTGTTVTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIES |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-06-01 Deposition Author(s): Austin, S.K. , Center For Structural Genomics Of Infectious Diseases (Csgid) , Fremont, D.H. , Nelson, C.A.