4ESJ
Restriction endonuclease dpni in complex with target dna
PDB DOI: 10.2210/pdb4esj/pdb
Classification: HYDROLASE/DNA Organism(s): Streptococcus Pneumoniae , Synthetic Construct
Deposited: 2012-04-23 Deposition Author(s): Bochtler, M. , Bujnicki, J.M. , Czapinska, H. , Siwek, W. , Skowronek, K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.05 Å
Restriction endonuclease dpni in complex with target dna
Bochtler, M. , Bujnicki, J.M. , Czapinska, H. , Siwek, W. , Skowronek, K.
Primary Citation of Related Structures: 4ESJ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Type-2 restriction enzyme DpnI | A | 257 | Streptococcus Pneumoniae , Synthetic Construct | GPHMELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTINDGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTANRAGWIGCNIDLSQVPSKGRIFLVQDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYRKL |
| Type-2 restriction enzyme DpnI | B | 257 | Streptococcus Pneumoniae , Synthetic Construct | GPHMELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTINDGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTANRAGWIGCNIDLSQVPSKGRIFLVQDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYRKL |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*CP*TP*GP*GP*(6MA)P*TP*CP*CP*AP*G)-3') | c | 10 | NA | CTGGATCCAG |
| DNA (5'-D(*CP*TP*GP*GP*(6MA)P*TP*CP*CP*AP*G)-3') | d | 10 | NA | CTGGATCCAG |
| DNA (5'-D(*CP*TP*GP*GP*(6MA)P*TP*CP*CP*AP*G)-3') | e | 10 | NA | CTGGATCCAG |
| DNA (5'-D(*CP*TP*GP*GP*(6MA)P*TP*CP*CP*AP*G)-3') | f | 10 | NA | CTGGATCCAG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-04-23 Deposition Author(s): Bochtler, M. , Bujnicki, J.M. , Czapinska, H. , Siwek, W. , Skowronek, K.