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4ELM

Crystal structure of the mouse cd1d-lysosulfatide-hy19.3 tcr complex

PDB DOI: 10.2210/pdb4elm/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus

Deposited: 2012-04-11
Deposition Author(s): Girardi, E. , Iyer, P. , Kumar, V. , Mac, T.T. , Maricic, I. , Wang, J. , Zajonc, D.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.48 Å

4elm
Literature

Crystal structure of the mouse cd1d-lysosulfatide-hy19.3 tcr complex

Girardi, E. , Iyer, P. , Kumar, V. , Mac, T.T. , Maricic, I. , Wang, J. , Zajonc, D.M.

Primary Citation of Related Structures: 4ELM


Proteins
Molecule Chains Sequence Length Organism Sequence
Antigen-presenting glycoprotein CD1d1 A 285 Mus Musculus SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWHHHHHH
Antigen-presenting glycoprotein CD1d1 C 285 Mus Musculus SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWHHHHHH
Beta-2 microglobulin B 99 Mus Musculus IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
Beta-2 microglobulin D 99 Mus Musculus IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
Hy19.3 TCR alpha chain (mouse variable domain, human constant domain) E 208 Mus Musculus MQQKVQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQGLTFGLGTRVSVFPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
Hy19.3 TCR alpha chain (mouse variable domain, human constant domain) G 208 Mus Musculus MQQKVQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQGLTFGLGTRVSVFPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
Hy19.3 TCR beta chain (mouse variable domain, human constant domain) F 244 Mus Musculus MGPKVLQIPSHQIIDMGQMVTLNCDPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA
Hy19.3 TCR beta chain (mouse variable domain, human constant domain) H 244 Mus Musculus MGPKVLQIPSHQIIDMGQMVTLNCDPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-04-11
Deposition Author(s): Girardi, E. , Iyer, P. , Kumar, V. , Mac, T.T. , Maricic, I. , Wang, J. , Zajonc, D.M.