PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4E7J

Pfv integrase target capture complex, apo form (tcc-apo), at 3.15 a resolution

PDB DOI: 10.2210/pdb4e7j/pdb

Classification: RECOMBINATION/DNA
Organism(s): Human Spumaretrovirus , Synthetic Construct

Deposited: 2012-03-17
Deposition Author(s): Cherepanov, P. , Maertens, G.N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1501 Å

Literature

Pfv integrase target capture complex, apo form (tcc-apo), at 3.15 a resolution

Cherepanov, P. , Maertens, G.N.

Primary Citation of Related Structures: 4E7J


Proteins
Molecule Chains Sequence Length Organism Sequence
Pro-Pol polyprotein A 395 Human Spumaretrovirus , Synthetic Construct GPGCNTKKPNLDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDHLGNNRTVSIDNLKPTSHQNGTTNDTATMDHLEKNE
Pro-Pol polyprotein B 395 Human Spumaretrovirus , Synthetic Construct GPGCNTKKPNLDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDHLGNNRTVSIDNLKPTSHQNGTTNDTATMDHLEKNE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3') c 19 NA ATTGTCATGGAATTTCGCA
DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3') d 17 NA TGCGAAATTCCATGACA
DNA (5'-D(*CP*CP*CP*GP*AP*GP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*CP*TP*CP*GP*GP*G)-3') t 30 NA CCCGAGGCACGTGCTAGCACGTGCCTCGGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-03-17
Deposition Author(s): Cherepanov, P. , Maertens, G.N.