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4DII

X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of potassium ions

PDB DOI: 10.2210/pdb4dii/pdb

Classification: HYDROLASE/HYDROLASE INHIBITOR/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2012-01-31
Deposition Author(s): Mazzarella, L. , Merlino, A. , Russo Krauss, I. , Sica, F.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.05 Å

4dii
Literature

X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of potassium ions

Mazzarella, L. , Merlino, A. , Russo Krauss, I. , Sica, F.

Primary Citation of Related Structures: 4DII


Proteins
Molecule Chains Sequence Length Organism Sequence
Prothrombin L 36 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR
Prothrombin H 259 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Thrombin binding aptamer d 15 NA GGTTGGTGTGGTTGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-01-31
Deposition Author(s): Mazzarella, L. , Merlino, A. , Russo Krauss, I. , Sica, F.