4D69
Soybean agglutinin from glycine max in complex with the antigen tn
PDB DOI: 10.2210/pdb4d69/pdb
Classification: SUGAR BINDING PROTEIN Organism(s): Glycine Max , Synthetic Construct
Deposited: 2014-11-10 Deposition Author(s): Asensio, J.L. , Avenoza, A. , Busto, J.H. , Castro-Lopez, J. , Coelho, H. , Corzana, F. , Hurtado-Guerrero, R. , Jimenez-Barbero, J. , Madariaga, D. , Marcelo, F. , Martinez-Saez, N. , Peregrina, J.M. , Somovilla, V.J. , Valero-Gonzalez, J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Soybean agglutinin from glycine max in complex with the antigen tn
Asensio, J.L. , Avenoza, A. , Busto, J.H. , Castro-Lopez, J. , Coelho, H. , Corzana, F. , Hurtado-Guerrero, R. , Jimenez-Barbero, J. , Madariaga, D. , Marcelo, F. , Martinez-Saez, N. , Peregrina, J.M. , Somovilla, V.J. , Valero-Gonzalez, J.
Primary Citation of Related Structures: 4D69
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| LECTIN | A | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | B | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | C | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | D | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | E | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | F | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | G | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | H | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | I | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | J | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | K | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| LECTIN | L | 253 | Glycine Max , Synthetic Construct | AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHEAI |
| SHORT ANTIGEN PEPTIDE | O | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | P | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | Q | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | R | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | S | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | T | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | U | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | V | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | W | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | X | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | Y | 5 | Glycine Max , Synthetic Construct | APDTR |
| SHORT ANTIGEN PEPTIDE | Z | 5 | Glycine Max , Synthetic Construct | APDTR |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2014-11-10 Deposition Author(s): Asensio, J.L. , Avenoza, A. , Busto, J.H. , Castro-Lopez, J. , Coelho, H. , Corzana, F. , Hurtado-Guerrero, R. , Jimenez-Barbero, J. , Madariaga, D. , Marcelo, F. , Martinez-Saez, N. , Peregrina, J.M. , Somovilla, V.J. , Valero-Gonzalez, J.