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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4D1Q

Hermes transposase bound to its terminal inverted repeat

PDB DOI: 10.2210/pdb4d1q/pdb

Classification: PROTEIN-DNA COMPLEX
Organism(s): Musca Domestica , Synthetic Construct

Deposited: 2014-05-04
Deposition Author(s): Atkinson, P. , Bax, A. , Craig, N.L. , Doss, A.L. , Dyda, F. , Ewis, H. , Grishaev, A. , Hickman, A.B. , Knapp, J. , Laver, T. , Li, X. , Steven, A. , Tolun, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.4 Å

4d1q
Literature

Hermes transposase bound to its terminal inverted repeat

Atkinson, P. , Bax, A. , Craig, N.L. , Doss, A.L. , Dyda, F. , Ewis, H. , Grishaev, A. , Hickman, A.B. , Knapp, J. , Laver, T. , Li, X. , Steven, A. , Tolun, G.

Primary Citation of Related Structures: 4D1Q


Proteins
Molecule Chains Sequence Length Organism Sequence
TRANSPOSASE A 536 Musca Domestica , Synthetic Construct HMQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYKNFCKLDI
TRANSPOSASE B 536 Musca Domestica , Synthetic Construct HMQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYKNFCKLDI
TRANSPOSASE G 536 Musca Domestica , Synthetic Construct HMQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYKNFCKLDI
TRANSPOSASE H 536 Musca Domestica , Synthetic Construct HMQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYKNFCKLDI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
TERMINAL INVERTED REPEAT c 15 NA AGAGAACAACAACAA
TERMINAL INVERTED REPEAT e 15 NA AGAGAACAACAACAA
TERMINAL INVERTED REPEAT i 15 NA AGAGAACAACAACAA
TERMINAL INVERTED REPEAT k 15 NA AGAGAACAACAACAA
TERMINAL INVERTED REPEAT d 16 NA TTGTTGTTGTTCTCTG
TERMINAL INVERTED REPEAT f 16 NA TTGTTGTTGTTCTCTG
TERMINAL INVERTED REPEAT j 16 NA TTGTTGTTGTTCTCTG
TERMINAL INVERTED REPEAT l 16 NA TTGTTGTTGTTCTCTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-05-04
Deposition Author(s): Atkinson, P. , Bax, A. , Craig, N.L. , Doss, A.L. , Dyda, F. , Ewis, H. , Grishaev, A. , Hickman, A.B. , Knapp, J. , Laver, T. , Li, X. , Steven, A. , Tolun, G.