4BUL
Novel hydroxyl tricyclics (e.g. gsk966587) as potent inhibitors of bacterial type iia topoisomerases
PDB DOI: 10.2210/pdb4bul/pdb
Classification: ISOMERASE Organism(s): Staphylococcus Aureus , Synthetic Construct
Deposited: 2013-06-20 Deposition Author(s): Bax, B. , Brooks, G. , Brown, B.S. , Brown, P. , Cailleau, N. , Chen, D. , Dabbs, S. , Davies, D.T. , Esken, J.M. , Giordano, I. , Gwynn, M.N. , Hennessy, A.J. , Hoover, J.L. , Huang, J. , Jones, G.E. , Markwell, R.E. , Miles, T.J. , Minthorn, E.A. , Pearson, N.D. , Rittenhouse, S. , Spitzfaden, C. , Sukmar, S.K.K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.6 Å
Novel hydroxyl tricyclics (e.g. gsk966587) as potent inhibitors of bacterial type iia topoisomerases
Bax, B. , Brooks, G. , Brown, B.S. , Brown, P. , Cailleau, N. , Chen, D. , Dabbs, S. , Davies, D.T. , Esken, J.M. , Giordano, I. , Gwynn, M.N. , Hennessy, A.J. , Hoover, J.L. , Huang, J. , Jones, G.E. , Markwell, R.E. , Miles, T.J. , Minthorn, E.A. , Pearson, N.D. , Rittenhouse, S. , Spitzfaden, C. , Sukmar, S.K.K.
Primary Citation of Related Structures: 4BUL
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A | A | 692 | Staphylococcus Aureus , Synthetic Construct | MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPTGYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDFAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLG |
| DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A | C | 692 | Staphylococcus Aureus , Synthetic Construct | MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPTGYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDFAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*TP*GP*TP*GP*CP*GP*GP*TP*GP*TP*AP*CP*CP*TP *AP*CP*GP*GP*CP*T)-3' | e | 20 | NA | TGTGCGGTGTACCTACGGCT |
| 5'-D(*TP*GP*TP*GP*CP*GP*GP*TP*GP*TP*AP*CP*CP*TP *AP*CP*GP*GP*CP*T)-3' | g | 20 | NA | TGTGCGGTGTACCTACGGCT |
| 5'-D(*AP*GP*CP*CP*GP*TP*AP*GP*GP*TP*AP*CP*AP*CP *CP*GP*CP*AP*C)-3' | f | 20 | NA | AGCCGTAGGTACACCGCACA |
| 5'-D(*AP*GP*CP*CP*GP*TP*AP*GP*GP*TP*AP*CP*AP*CP *CP*GP*CP*AP*C)-3' | h | 20 | NA | AGCCGTAGGTACACCGCACA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2013-06-20 Deposition Author(s): Bax, B. , Brooks, G. , Brown, B.S. , Brown, P. , Cailleau, N. , Chen, D. , Dabbs, S. , Davies, D.T. , Esken, J.M. , Giordano, I. , Gwynn, M.N. , Hennessy, A.J. , Hoover, J.L. , Huang, J. , Jones, G.E. , Markwell, R.E. , Miles, T.J. , Minthorn, E.A. , Pearson, N.D. , Rittenhouse, S. , Spitzfaden, C. , Sukmar, S.K.K.