PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4BTP

Structure of the capsid protein p1 of the bacteriophage phi8

PDB DOI: 10.2210/pdb4btp/pdb

Classification: VIRAL PROTEIN
Organism(s): Pseudomonas Phage Phi8

Deposited: 2013-06-18
Deposition Author(s): Bamford, D.H. , El Omari, K. , Grimes, J.M. , Mancini, E.J. , Ravantti, J.J. , Stuart, D.I. , Sutton, G. , Walter, T.S. , Zhang, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.7 Å

4btp
Literature

Structure of the capsid protein p1 of the bacteriophage phi8

Bamford, D.H. , El Omari, K. , Grimes, J.M. , Mancini, E.J. , Ravantti, J.J. , Stuart, D.I. , Sutton, G. , Walter, T.S. , Zhang, H.

Primary Citation of Related Structures: 4BTP


Proteins
Molecule Chains Sequence Length Organism Sequence
p1 A 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 B 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 C 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 D 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 E 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 F 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 G 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 H 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 I 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
p1 J 792 Pseudomonas Phage Phi8 MSKLDLGRVDLLSMLGNSSSAGVDTAKGVIPFSTSGATWAVPRLSEDGITSHFLRRRGYVTMTQGGSRDQNAAVRKILSLIIAYDIQTQACFFISNEESMRITMAETMGVKDRPNARTNSWAEVSDSDINRGIAKALKEGNLTLDENQKDGFMKLVHAFVADILAQSGHYKPVTSVTYFSAPIDMESDYLDPFSIAIIRDVLDDSPFSELRYDARAMSELEDRDVPITRFSRVMAQMGNAMVRNIMVLNEAAQRKLRGLAVVGEIVHGRVRAPVRYLNDSFIQTLRSNINFHLLTRTTPERWAQSWIQAFGSLKGWVDAINGIADATTEEEKKKLAMQTSMDLELLSDLTPLIRDAATSVEKFVTFAPLSFYQGLGSVTQIRALDSSTNLAAVIVRYAAKEINLIPAYQSFQVPTVDVAVKKTAIMDQRLSLQLPEFSEDQFFGMLEQRMQNMSDSEVAELVDRIAKGETPFGDVVKQLPGTSTLLVTNGYYMGGLLTNEDKIIPGDASVPALLYMQAASFASSVRFPPGEYPVFHHESSNGDVRLTDQVSADAQLSHSAVETANPLNFLVACNVSVHTPSIAIDIIEPMPDLTRRGTTEYVHKGEIKVAAIPSLPPKSADRKAQVSRETAKFERVLYKARKGGAQVAAPIDLESLFGIAVNLAVPTVKHVYSPDSKTKLALDIIKGLESDGDKAAATRLLMTLARAYTGTYSSLALRRRDEITGIAAQPSDVAMQEFALQSGVQTLKAVAKHTGIMEVATIEMVEEKVRSLDDNRFYEIAAEVVLRALKGM
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-06-18
Deposition Author(s): Bamford, D.H. , El Omari, K. , Grimes, J.M. , Mancini, E.J. , Ravantti, J.J. , Stuart, D.I. , Sutton, G. , Walter, T.S. , Zhang, H.