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4BDP

Crystal structure of bacillus dna polymerase i fragment complexed to 11 base pairs of duplex dna after addition of two datp residues

PDB DOI: 10.2210/pdb4bdp/pdb

Classification: TRANSFERASE/DNA
Organism(s): Geobacillus Stearothermophilus , Synthetic Construct

Deposited: 1997-11-17
Deposition Author(s): Beese, L.S. , Kiefer, J.R. , Mao, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.8 Å

4bdp
Literature

Crystal structure of bacillus dna polymerase i fragment complexed to 11 base pairs of duplex dna after addition of two datp residues

Beese, L.S. , Kiefer, J.R. , Mao, C.

Primary Citation of Related Structures: 4BDP


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*AP*TP*CP*AP*TP*GP*CP*AP*A)-3') p 11 NA GCATCATGCAA
DNA (5'-D(*TP*AP*TP*TP*GP*CP*AP*TP*GP*AP*TP*GP*C)-3') t 13 NA TATTGCATGATGC

Proteins
Molecule Chains Sequence Length Organism Sequence
PROTEIN (DNA POLYMERASE I) A 580 Geobacillus Stearothermophilus , Synthetic Construct AAMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVRAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 1997-11-17
Deposition Author(s): Beese, L.S. , Kiefer, J.R. , Mao, C.