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4B5J

Neisseria ap endonuclease bound to the substrate with an orphan adenine base

PDB DOI: 10.2210/pdb4b5j/pdb

Classification: HYDROLASE/DNA
Organism(s): Neisseria Meningitidis , Synthetic Construct

Deposited: 2012-08-03
Deposition Author(s): Baldwin, G.S. , Carpenter, E.P. , Freemont, P.S. , Jensen, K. , Lu, D. , Macdonald, J.T. , Silhan, J. , Tang, C.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

Literature

Neisseria ap endonuclease bound to the substrate with an orphan adenine base

Baldwin, G.S. , Carpenter, E.P. , Freemont, P.S. , Jensen, K. , Lu, D. , Macdonald, J.T. , Silhan, J. , Tang, C.M.

Primary Citation of Related Structures: 4B5J


Proteins
Molecule Chains Sequence Length Organism Sequence
PUTATIVE EXODEOXYRIBONUCLEASE A 259 Neisseria Meningitidis , Synthetic Construct MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*CP*TP*AP*CP*(3DR)P*CP*AP*TP*CP*GP)-3' u 11 NA GCTACNCATCG
5'-D(*CP*GP*AP*TP*GP*AP*GP*TP*AP*GP*CP)-3' v 11 NA CGATGAGTAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-08-03
Deposition Author(s): Baldwin, G.S. , Carpenter, E.P. , Freemont, P.S. , Jensen, K. , Lu, D. , Macdonald, J.T. , Silhan, J. , Tang, C.M.