4B5G
Substrate bound neisseria ap endonuclease in absence of metal ions (crystal form 2)
PDB DOI: 10.2210/pdb4b5g/pdb
Classification: HYDROLASE/DNA Organism(s): Neisseria Meningitidis , Synthetic Construct
Deposited: 2012-08-03 Deposition Author(s): Baldwin, G.S. , Carpenter, E.P. , Freemont, P.S. , Jensen, K. , Lu, D. , Macdonald, J.T. , Silhan, J. , Tang, C.M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.75 Å
Substrate bound neisseria ap endonuclease in absence of metal ions (crystal form 2)
Baldwin, G.S. , Carpenter, E.P. , Freemont, P.S. , Jensen, K. , Lu, D. , Macdonald, J.T. , Silhan, J. , Tang, C.M.
Primary Citation of Related Structures: 4B5G
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| EXODEOXYRIBONUCLEASE | A | 259 | Neisseria Meningitidis , Synthetic Construct | MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE |
| EXODEOXYRIBONUCLEASE | B | 259 | Neisseria Meningitidis , Synthetic Construct | MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE |
| EXODEOXYRIBONUCLEASE | C | 259 | Neisseria Meningitidis , Synthetic Construct | MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*CP*TP*AP*CP*(3DR)P*CP*AP*TP*CP*GP)-3' | u | 11 | NA | GCTACNCATCG |
| 5'-D(*GP*CP*TP*AP*CP*(3DR)P*CP*AP*TP*CP*GP)-3' | w | 11 | NA | GCTACNCATCG |
| 5'-D(*GP*CP*TP*AP*CP*(3DR)P*CP*AP*TP*CP*GP)-3' | y | 11 | NA | GCTACNCATCG |
| 5'-D(*CP*GP*AP*TP*GP*GP*GP*TP*AP*GP*CP)-3' | v | 11 | NA | CGATGGGTAGC |
| 5'-D(*CP*GP*AP*TP*GP*GP*GP*TP*AP*GP*CP)-3' | x | 11 | NA | CGATGGGTAGC |
| 5'-D(*CP*GP*AP*TP*GP*GP*GP*TP*AP*GP*CP)-3' | z | 11 | NA | CGATGGGTAGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-08-03 Deposition Author(s): Baldwin, G.S. , Carpenter, E.P. , Freemont, P.S. , Jensen, K. , Lu, D. , Macdonald, J.T. , Silhan, J. , Tang, C.M.