PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4B20

Structural basis of dna loop recognition by endonuclease v

PDB DOI: 10.2210/pdb4b20/pdb

Classification: HYDROLASE
Organism(s): Thermotoga Maritima , Synthetic Construct

Deposited: 2012-07-12
Deposition Author(s): Alseth, I. , Bjoras, M. , Dalhus, B. , Forstrom, R.J. , Rosnes, I. , Rowe, A.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.75 Å

Literature

Structural basis of dna loop recognition by endonuclease v

Alseth, I. , Bjoras, M. , Dalhus, B. , Forstrom, R.J. , Rosnes, I. , Rowe, A.D.

Primary Citation of Related Structures: 4B20


Proteins
Molecule Chains Sequence Length Organism Sequence
ENDONUCLEASE V A 225 Thermotoga Maritima , Synthetic Construct MDYRQLHRWDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAVIVVLEYPSFKILEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLYGTFKMPEDKRCSWSYLYDGEEIIGCVIRTKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYTQRLKKGLF
ENDONUCLEASE V B 225 Thermotoga Maritima , Synthetic Construct MDYRQLHRWDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAVIVVLEYPSFKILEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLYGTFKMPEDKRCSWSYLYDGEEIIGCVIRTKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYTQRLKKGLF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*CP*GP*AP*CP*AP*GP)-3' c 7 NA GCGACAG
5'-D(*GP*CP*GP*AP*CP*AP*GP)-3' f 7 NA GCGACAG
5'-D(*AP*TP*CP*TP*TP*GP*TP*CP*GP*CP)-3' d 10 NA ATCTTGTCGC
5'-D(*AP*TP*CP*TP*TP*GP*TP*CP*GP*CP)-3' g 10 NA ATCTTGTCGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-07-12
Deposition Author(s): Alseth, I. , Bjoras, M. , Dalhus, B. , Forstrom, R.J. , Rosnes, I. , Rowe, A.D.