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FASTA Sequence PDB Format mmCIF Format
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4A8S

Non-catalytic ions direct the rna-dependent rna polymerase of bacterial dsrna virus phi6 from de novo initiation to elongation

PDB DOI: 10.2210/pdb4a8s/pdb

Classification: TRANSFERASE/DNA
Organism(s): Pseudomonas Phage Phi6 , Synthetic Construct

Deposited: 2011-11-21
Deposition Author(s): Bamford, D.H. , Grimes, J.M. , Poranen, M.M. , Stuart, D.I. , Wright, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

4a8s
Literature

Non-catalytic ions direct the rna-dependent rna polymerase of bacterial dsrna virus phi6 from de novo initiation to elongation

Bamford, D.H. , Grimes, J.M. , Poranen, M.M. , Stuart, D.I. , Wright, S.

Primary Citation of Related Structures: 4A8S


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-DIRECTED RNA POLYMERASE A 665 Pseudomonas Phage Phi6 , Synthetic Construct MPRRAPAFPLSDIKAQMLFANNIKAQQASKRSFKEGAIETYEGLLSVDPRFLSFKNELSRYLTDHFPANVDEYGRVYGNGVRTNFFGMRHMNGFPMIPATWPLASNLKKRADADLADGPVSERDNLLFRAAVRLMFSDLEPVPLKIRKGSSTCIPYFSNDMGTKIEIAERALEKAEEAGNLMLQGKFDDAYQLHQMGGAYYVVYRAQSTDAITLDPKTGKFVSKDRMVADFEYAVTGGEQGSLFAASKDASRLKEQYGIDVPDGFFCERRRTAMGGPFALNAPIMAVAQPVRNKIYSKYAYTFHHTTRLNKEEKVKEWSLCVATDVSDHDTFWPGWLRDLICDELLNMGYAPWWVKLFETSLKLPVYVGAPAPEQGHTLLGDPSNPDLEVGLSSGQGATDLMGTLLMSITYLVMQLDHTAPHLNSRIKDMPSACRFLDSYWQGHEEIRQISKSDDAMLGWTKGRALVGGHRLFEMLKEGKVNPSPYMKISYEHGGAFLGDILLYDSRREPGSAIFVGNINSMLNNQFSPEYGVQSGVRDRSKRKRPFPGLAWASMKDTYGACPIYSDVLEAIERCWWNAFGESYRAYREDMLKRDTLELSRYVASMARQAGLAELTPIDLEVLADPNKLQYKWTQADVSANIHEVLMHGVSVEKTERFLRSVMPR
RNA-DIRECTED RNA POLYMERASE B 665 Pseudomonas Phage Phi6 , Synthetic Construct MPRRAPAFPLSDIKAQMLFANNIKAQQASKRSFKEGAIETYEGLLSVDPRFLSFKNELSRYLTDHFPANVDEYGRVYGNGVRTNFFGMRHMNGFPMIPATWPLASNLKKRADADLADGPVSERDNLLFRAAVRLMFSDLEPVPLKIRKGSSTCIPYFSNDMGTKIEIAERALEKAEEAGNLMLQGKFDDAYQLHQMGGAYYVVYRAQSTDAITLDPKTGKFVSKDRMVADFEYAVTGGEQGSLFAASKDASRLKEQYGIDVPDGFFCERRRTAMGGPFALNAPIMAVAQPVRNKIYSKYAYTFHHTTRLNKEEKVKEWSLCVATDVSDHDTFWPGWLRDLICDELLNMGYAPWWVKLFETSLKLPVYVGAPAPEQGHTLLGDPSNPDLEVGLSSGQGATDLMGTLLMSITYLVMQLDHTAPHLNSRIKDMPSACRFLDSYWQGHEEIRQISKSDDAMLGWTKGRALVGGHRLFEMLKEGKVNPSPYMKISYEHGGAFLGDILLYDSRREPGSAIFVGNINSMLNNQFSPEYGVQSGVRDRSKRKRPFPGLAWASMKDTYGACPIYSDVLEAIERCWWNAFGESYRAYREDMLKRDTLELSRYVASMARQAGLAELTPIDLEVLADPNKLQYKWTQADVSANIHEVLMHGVSVEKTERFLRSVMPR
RNA-DIRECTED RNA POLYMERASE C 665 Pseudomonas Phage Phi6 , Synthetic Construct MPRRAPAFPLSDIKAQMLFANNIKAQQASKRSFKEGAIETYEGLLSVDPRFLSFKNELSRYLTDHFPANVDEYGRVYGNGVRTNFFGMRHMNGFPMIPATWPLASNLKKRADADLADGPVSERDNLLFRAAVRLMFSDLEPVPLKIRKGSSTCIPYFSNDMGTKIEIAERALEKAEEAGNLMLQGKFDDAYQLHQMGGAYYVVYRAQSTDAITLDPKTGKFVSKDRMVADFEYAVTGGEQGSLFAASKDASRLKEQYGIDVPDGFFCERRRTAMGGPFALNAPIMAVAQPVRNKIYSKYAYTFHHTTRLNKEEKVKEWSLCVATDVSDHDTFWPGWLRDLICDELLNMGYAPWWVKLFETSLKLPVYVGAPAPEQGHTLLGDPSNPDLEVGLSSGQGATDLMGTLLMSITYLVMQLDHTAPHLNSRIKDMPSACRFLDSYWQGHEEIRQISKSDDAMLGWTKGRALVGGHRLFEMLKEGKVNPSPYMKISYEHGGAFLGDILLYDSRREPGSAIFVGNINSMLNNQFSPEYGVQSGVRDRSKRKRPFPGLAWASMKDTYGACPIYSDVLEAIERCWWNAFGESYRAYREDMLKRDTLELSRYVASMARQAGLAELTPIDLEVLADPNKLQYKWTQADVSANIHEVLMHGVSVEKTERFLRSVMPR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*GP*CP*GP)-3' f 13 NA TTTTCGCGTAGCG
5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*GP*CP*GP)-3' g 13 NA TTTTCGCGTAGCG
5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*GP*CP*GP)-3' h 13 NA TTTTCGCGTAGCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-11-21
Deposition Author(s): Bamford, D.H. , Grimes, J.M. , Poranen, M.M. , Stuart, D.I. , Wright, S.