4A36
Structure of duck rig-i helicase domain bound to 19-mer dsrna and atp transition state analogue
PDB DOI: 10.2210/pdb4a36/pdb
Classification: RNA BINDING PROTEIN/RNA Organism(s): Anas Platyrhynchos , Synthetic Construct
Deposited: 2011-09-30 Deposition Author(s): Cusack, S. , Kowalinski, E. , Lunardi, T. , Mccarthy, A.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.7 Å
Structure of duck rig-i helicase domain bound to 19-mer dsrna and atp transition state analogue
Cusack, S. , Kowalinski, E. , Lunardi, T. , Mccarthy, A.A.
Primary Citation of Related Structures: 4A36
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RETINOIC ACID INDUCIBLE PROTEIN I | A | 556 | Anas Platyrhynchos , Synthetic Construct | GAMETKKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTIYSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRDS |
| RETINOIC ACID INDUCIBLE PROTEIN I | B | 556 | Anas Platyrhynchos , Synthetic Construct | GAMETKKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTIYSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRDS |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-R(*GP*CP*AP*UP*GP*CP*GP*AP*CP*CP*UP*CP*UP*GP *UP*UP*UP*GP*A)-3' | r | 19 | NA | GCAUGCGACCUCUGUUUGA |
| 5'-R(*GP*CP*AP*UP*GP*CP*GP*AP*CP*CP*UP*CP*UP*GP *UP*UP*UP*GP*A)-3' | t | 19 | NA | GCAUGCGACCUCUGUUUGA |
| 5'-R(*UP*CP*AP*AP*AP*CP*AP*GP*AP*GP*GP*UP*CP*GP *CP*AP*UP*GP*C)-3' | s | 19 | NA | UCAAACAGAGGUCGCAUGC |
| 5'-R(*UP*CP*AP*AP*AP*CP*AP*GP*AP*GP*GP*UP*CP*GP *CP*AP*UP*GP*C)-3' | u | 19 | NA | UCAAACAGAGGUCGCAUGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-09-30 Deposition Author(s): Cusack, S. , Kowalinski, E. , Lunardi, T. , Mccarthy, A.A.