PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3WVK

Time-resolved crystal structure of hindiii with 230sec soaking

PDB DOI: 10.2210/pdb3wvk/pdb

Classification: HYDROLASE/DNA
Organism(s): Haemophilus Influenzae , Synthetic Construct

Deposited: 2014-05-22
Deposition Author(s): Kawamura, T. , Kobayashi, T. , Watanabe, N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

Literature

Time-resolved crystal structure of hindiii with 230sec soaking

Kawamura, T. , Kobayashi, T. , Watanabe, N.

Primary Citation of Related Structures: 3WVK


Proteins
Molecule Chains Sequence Length Organism Sequence
Type-2 restriction enzyme HindIII A 300 Haemophilus Influenzae , Synthetic Construct MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL
Type-2 restriction enzyme HindIII B 300 Haemophilus Influenzae , Synthetic Construct MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL
Type-2 restriction enzyme HindIII C 300 Haemophilus Influenzae , Synthetic Construct MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL
Type-2 restriction enzyme HindIII D 300 Haemophilus Influenzae , Synthetic Construct MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') m 12 NA GCCAAGCTTGGC
DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') n 12 NA GCCAAGCTTGGC
DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') o 12 NA GCCAAGCTTGGC
DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') p 12 NA GCCAAGCTTGGC
DNA (5'-D(*GP*CP*CP*A)-3') e 4 NA GCCA
DNA (5'-D(*GP*CP*CP*A)-3') g 4 NA GCCA
DNA (5'-D(*GP*CP*CP*A)-3') i 4 NA GCCA
DNA (5'-D(*GP*CP*CP*A)-3') k 4 NA GCCA
DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') f 8 NA AGCTTGGC
DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') h 8 NA AGCTTGGC
DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') j 8 NA AGCTTGGC
DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') l 8 NA AGCTTGGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-05-22
Deposition Author(s): Kawamura, T. , Kobayashi, T. , Watanabe, N.