Crystal structure of the complex comprised of ets1(y329a), runx1, cbfbeta, and the tcralpha gene enhancer dna
PDB DOI: 10.2210/pdb3wtx/pdb
Classification: TRANSCRIPTION/DNA Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct
Deposited: 2014-04-21 Deposition Author(s): Hamada, K. , Ogata, K. , Shiina, M.
Method: X-RAY DIFFRACTION Resolution: 2.8 Å
Crystal structure of the complex comprised of ets1(y329a), runx1, cbfbeta, and the tcralpha gene enhancer dna
Hamada, K. , Ogata, K. , Shiina, M.
Primary Citation of Related Structures: 3WTX
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Runt-related transcription factor 1 | A | 204 | Homo Sapiens , Mus Musculus , Synthetic Construct | GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVAKGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDARQIQPSPPWSYDQSYQYLGS |
Runt-related transcription factor 1 | F | 204 | Homo Sapiens , Mus Musculus , Synthetic Construct | GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVAKGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDARQIQPSPPWSYDQSYQYLGS |
Core-binding factor subunit beta | B | 142 | Homo Sapiens , Mus Musculus , Synthetic Construct | MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDALAQQA |
Core-binding factor subunit beta | G | 142 | Homo Sapiens , Mus Musculus , Synthetic Construct | MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDALAQQA |
Protein C-ets-1 | C | 166 | Homo Sapiens , Mus Musculus , Synthetic Construct | SLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGATGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE |
Protein C-ets-1 | H | 166 | Homo Sapiens , Mus Musculus , Synthetic Construct | SLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGATGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3') | d | 15 | NA | GAAGCCACATCCTCT |
DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3') | i | 15 | NA | GAAGCCACATCCTCT |
DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3') | e | 15 | NA | AGAGGATGTGGCTTC |
DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3') | j | 15 | NA | AGAGGATGTGGCTTC |
Method: X-RAY DIFFRACTION
Deposited Date: 2014-04-21 Deposition Author(s): Hamada, K. , Ogata, K. , Shiina, M.