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3VYQ

Crystal structure of the methyl cpg binding domain of mbd4 in complex with the 5mcg/tg sequence in space group p1

PDB DOI: 10.2210/pdb3vyq/pdb

Classification: HYDROLASE/DNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2012-10-02
Deposition Author(s): Arita, K. , Ariyoshi, M. , Kato, T. , Kinoshita, M. , Otani, J. , Shirakawa, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.525 Å

Literature

Crystal structure of the methyl cpg binding domain of mbd4 in complex with the 5mcg/tg sequence in space group p1

Arita, K. , Ariyoshi, M. , Kato, T. , Kinoshita, M. , Otani, J. , Shirakawa, M.

Primary Citation of Related Structures: 3VYQ


Proteins
Molecule Chains Sequence Length Organism Sequence
Methyl-CpG-binding domain protein 4 A 74 Mus Musculus , Synthetic Construct STTATEGHKPVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGETFLKPEDFNFTVLPKG
Methyl-CpG-binding domain protein 4 D 74 Mus Musculus , Synthetic Construct STTATEGHKPVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGETFLKPEDFNFTVLPKG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*CP*AP*TP*CP*(5CM)P*GP*GP*TP*GP*A)-3') b 11 NA ACATCCGGTGA
DNA (5'-D(*TP*CP*AP*CP*TP*GP*GP*AP*TP*GP*T)-3') c 11 NA TCACTGGATGT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-10-02
Deposition Author(s): Arita, K. , Ariyoshi, M. , Kato, T. , Kinoshita, M. , Otani, J. , Shirakawa, M.