PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3VJR

Crystal structure of peptidyl-trna hydrolase from escherichia coli in complex with the cca-acceptor-t[psi]c domain of trna

PDB DOI: 10.2210/pdb3vjr/pdb

Classification: hydrolase/RNA
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2011-10-28
Deposition Author(s): Ito, K. , Miura, K.I. , Mochizuki, M. , Murakami, R. , Qi, H. , Shimizu, Y. , Uchiumi, T. , Ueda, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

3vjr
Literature

Crystal structure of peptidyl-trna hydrolase from escherichia coli in complex with the cca-acceptor-t[psi]c domain of trna

Ito, K. , Miura, K.I. , Mochizuki, M. , Murakami, R. , Qi, H. , Shimizu, Y. , Uchiumi, T. , Ueda, T.

Primary Citation of Related Structures: 3VJR


Proteins
Molecule Chains Sequence Length Organism Sequence
Peptidyl-tRNA hydrolase A 197 Escherichia Coli , Synthetic Construct GSHMTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ
Peptidyl-tRNA hydrolase C 197 Escherichia Coli , Synthetic Construct GSHMTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
tRNA CCA-acceptor b 36 NA GGGGGCUAAGCGGUUCGAUCCCGCUUAGCUCCACCA
tRNA CCA-acceptor d 36 NA GGGGGCUAAGCGGUUCGAUCCCGCUUAGCUCCACCA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-10-28
Deposition Author(s): Ito, K. , Miura, K.I. , Mochizuki, M. , Murakami, R. , Qi, H. , Shimizu, Y. , Uchiumi, T. , Ueda, T.