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3U61

Structure of t4 bacteriophage clamp loader bound to closed clamp, dna and atp analog and adp

PDB DOI: 10.2210/pdb3u61/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Enterobacteria Phage T4 , Synthetic Construct

Deposited: 2011-10-11
Deposition Author(s): Kelch, B.A. , Kuriyan, J. , Makino, D.L. , O'Donnell, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.2 Å

Literature

Structure of t4 bacteriophage clamp loader bound to closed clamp, dna and atp analog and adp

Kelch, B.A. , Kuriyan, J. , Makino, D.L. , O'Donnell, M.

Primary Citation of Related Structures: 3U61


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase accessory protein 44 B 324 Enterobacteria Phage T4 , Synthetic Construct GPGGSMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
DNA polymerase accessory protein 44 C 324 Enterobacteria Phage T4 , Synthetic Construct GPGGSMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
DNA polymerase accessory protein 44 D 324 Enterobacteria Phage T4 , Synthetic Construct GPGGSMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
DNA polymerase accessory protein 44 E 324 Enterobacteria Phage T4 , Synthetic Construct GPGGSMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
DNA polymerase accessory protein 62 A 199 Enterobacteria Phage T4 , Synthetic Construct SLFKDDIQLNEHQVAWYSKDWTAVQSAADSFKEKAENEFFEIIGAINNKTKCSIAQKDYSKFMVENALSQFPECMPAVYAMNLIGSGLSDEAHFNYLMAAVPRGKRYGKWAKLVEDSTEVLIIKLLAKRYQVNTNDAINYKSILTKNGKLPLVLKELKGLVTDDFLKEVTKNVKEQKQLKKLALEWGLEHHHHHHHHHH
DNA polymerase processivity component G 228 Enterobacteria Phage T4 , Synthetic Construct MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDF
DNA polymerase processivity component H 228 Enterobacteria Phage T4 , Synthetic Construct MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDF
DNA polymerase processivity component F 228 Enterobacteria Phage T4 , Synthetic Construct MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Template DNA strand i 20 NA TTTTTTTTTTGGTGTCTACG
Primer DNA strand j 10 NA CGTAGACACC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-10-11
Deposition Author(s): Kelch, B.A. , Kuriyan, J. , Makino, D.L. , O'Donnell, M.