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FASTA Sequence PDB Format mmCIF Format
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3TU4

Crystal structure of the sir3 bah domain in complex with a nucleosome core particle.

PDB DOI: 10.2210/pdb3tu4/pdb

Classification: Signaling Protein/Structural Protein/DNA
Organism(s): Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct

Deposited: 2011-09-15
Deposition Author(s): Armache, K.-J. , Canzio, D. , Garlick, J.D. , Kingston, R.E. , Narlikar, G.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

Literature

Crystal structure of the sir3 bah domain in complex with a nucleosome core particle.

Armache, K.-J. , Canzio, D. , Garlick, J.D. , Kingston, R.E. , Narlikar, G.J.

Primary Citation of Related Structures: 3TU4


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 135 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 E 135 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 102 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 102 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A C 129 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2A G 129 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2B 1.1 D 122 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B 1.1 H 122 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Regulatory protein SIR3 K 229 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct MAKTLKDLDGWQVIITDDQGRVIDDNNRRRSRKRGGENVFLKRISDGLSFGKGESVIFNDNVTETYSVYLIHEIRLNTLNNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFFNEVNKSELYLTAELSEIWLKDFIAVGQILPESQWNDSSIDKIEDRDFLVRYACEPTAEKFVPIDIFQIIRRVKEMEPKQSNEYLKRVSVSVDKLAAALEHHHHHH
Regulatory protein SIR3 L 229 Saccharomyces Cerevisiae S288C , Xenopus Laevis , Synthetic Construct MAKTLKDLDGWQVIITDDQGRVIDDNNRRRSRKRGGENVFLKRISDGLSFGKGESVIFNDNVTETYSVYLIHEIRLNTLNNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFFNEVNKSELYLTAELSEIWLKDFIAVGQILPESQWNDSSIDKIEDRDFLVRYACEPTAEKFVPIDIFQIIRRVKEMEPKQSNEYLKRVSVSVDKLAAALEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (146-MER) i 147 NA ATCGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGGATTCTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCGAT
DNA (146-MER) j 147 NA ATCGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGAGAATCCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-09-15
Deposition Author(s): Armache, K.-J. , Canzio, D. , Garlick, J.D. , Kingston, R.E. , Narlikar, G.J.