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3TAP

Crystal structure of bacillus dna polymerase i large fragment bound to duplex dna with cytosine-adenine mismatch at (n-3) position

PDB DOI: 10.2210/pdb3tap/pdb

Classification: TRANSFERASE/DNA
Organism(s): Geobacillus , Synthetic Construct

Deposited: 2011-08-04
Deposition Author(s): Beese, L.S. , Wang, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.655 Å

3tap
Literature

Crystal structure of bacillus dna polymerase i large fragment bound to duplex dna with cytosine-adenine mismatch at (n-3) position

Beese, L.S. , Wang, W.

Primary Citation of Related Structures: 3TAP


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase I A 592 Geobacillus , Synthetic Construct MESPSSEEEKPLAKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*G*CP*GP*AP*TP*CP*AP*CP*GP*CP*AP*C)-3' b 12 NA GCGATCACGCAC
5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3' c 16 NA GACGTACGTGATCGCA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-08-04
Deposition Author(s): Beese, L.S. , Wang, W.