3T5Q
3a structure of lassa virus nucleoprotein in complex with ssrna
PDB DOI: 10.2210/pdb3t5q/pdb
Classification: viral protein/RNA Organism(s): Escherichia Coli , Mopeia Lassa Reassortant 29
Deposited: 2011-07-27 Deposition Author(s): De La Torre, J.C. , Hastie, K.M. , King, L.B. , Liu, T. , Ngo, N. , Saphire, E.O. , Woods, V.L. , Zandonatti, M.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
3a structure of lassa virus nucleoprotein in complex with ssrna
De La Torre, J.C. , Hastie, K.M. , King, L.B. , Liu, T. , Ngo, N. , Saphire, E.O. , Woods, V.L. , Zandonatti, M.A.
Primary Citation of Related Structures: 3T5Q
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Nucleoprotein | A | 353 | Escherichia Coli , Mopeia Lassa Reassortant 29 | MAHHHHHHDDDKMMSASKEIKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQKSILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMSGGNQGARAGRDGVVRVWDVKNAELLSNQFGTMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTSDLDRLTQSHPILNMIDTKKSSLNISGYNFSLGAAVKAGACMLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVDLES |
| Nucleoprotein | B | 353 | Escherichia Coli , Mopeia Lassa Reassortant 29 | MAHHHHHHDDDKMMSASKEIKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQKSILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMSGGNQGARAGRDGVVRVWDVKNAELLSNQFGTMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTSDLDRLTQSHPILNMIDTKKSSLNISGYNFSLGAAVKAGACMLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVDLES |
| Nucleoprotein | E | 353 | Escherichia Coli , Mopeia Lassa Reassortant 29 | MAHHHHHHDDDKMMSASKEIKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQKSILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMSGGNQGARAGRDGVVRVWDVKNAELLSNQFGTMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTSDLDRLTQSHPILNMIDTKKSSLNISGYNFSLGAAVKAGACMLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVDLES |
| Nucleoprotein | G | 353 | Escherichia Coli , Mopeia Lassa Reassortant 29 | MAHHHHHHDDDKMMSASKEIKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQKSILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMSGGNQGARAGRDGVVRVWDVKNAELLSNQFGTMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTSDLDRLTQSHPILNMIDTKKSSLNISGYNFSLGAAVKAGACMLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVDLES |
| Nucleoprotein | I | 353 | Escherichia Coli , Mopeia Lassa Reassortant 29 | MAHHHHHHDDDKMMSASKEIKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQKSILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMSGGNQGARAGRDGVVRVWDVKNAELLSNQFGTMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTSDLDRLTQSHPILNMIDTKKSSLNISGYNFSLGAAVKAGACMLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVDLES |
| Nucleoprotein | K | 353 | Escherichia Coli , Mopeia Lassa Reassortant 29 | MAHHHHHHDDDKMMSASKEIKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQKSILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMSGGNQGARAGRDGVVRVWDVKNAELLSNQFGTMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTSDLDRLTQSHPILNMIDTKKSSLNISGYNFSLGAAVKAGACMLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVDLES |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (5'-R(P*UP*UP*AP*UP*CP*UP*CP*A)-3') | c | 8 | NA | UUAUCUCA |
| RNA (5'-R(P*UP*UP*AP*UP*CP*UP*CP*A)-3') | f | 8 | NA | UUAUCUCA |
| RNA (5'-R(P*UP*AP*UP*CP*UP*CP*A)-3') | d | 7 | NA | UAUCUCA |
| RNA (5'-R(P*UP*AP*UP*CP*UP*C)-3') | h | 6 | NA | UAUCUC |
| RNA (5'-R(P*UP*AP*UP*CP*UP*C)-3') | l | 6 | NA | UAUCUC |
| RNA (5'-R(P*UP*UP*AP*UP*CP*UP*CP*C)-3') | j | 8 | NA | UUAUCUCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-07-27 Deposition Author(s): De La Torre, J.C. , Hastie, K.M. , King, L.B. , Liu, T. , Ngo, N. , Saphire, E.O. , Woods, V.L. , Zandonatti, M.A.