PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3T5L

Ternary complex of hne adduct modified dna (5'-cxg-3' vs 14-mer) with dpo4 and incoming ddgt

PDB DOI: 10.2210/pdb3t5l/pdb

Classification: DNA/Transferase
Organism(s): Sulfolobus Solfataricus P2 , Synthetic Construct

Deposited: 2011-07-27
Deposition Author(s): Banerjee, S. , Christov, P.P. , Kozekova, A. , Rizzo, C.J. , Stone, M.P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

3t5l
Literature

Ternary complex of hne adduct modified dna (5'-cxg-3' vs 14-mer) with dpo4 and incoming ddgt

Banerjee, S. , Christov, P.P. , Kozekova, A. , Rizzo, C.J. , Stone, M.P.

Primary Citation of Related Structures: 3T5L


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 341 Sulfolobus Solfataricus P2 , Synthetic Construct MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*AP*CP*(HN0)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') b 17 NA CACXGAATCCTTCCCCC
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3') c 14 NA GGGGGAAGGATTCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-07-27
Deposition Author(s): Banerjee, S. , Christov, P.P. , Kozekova, A. , Rizzo, C.J. , Stone, M.P.