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3T5K

Ternary complex of hne adduct modified dna (5'-txg-3' vs 14-mer) with dpo4 and incoming ddtp

PDB DOI: 10.2210/pdb3t5k/pdb

Classification: DNA/Transferase
Organism(s): Mycobacterium Avium Subsp. Hominissuis 3388 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2011-07-27
Deposition Author(s): Banerjee, S. , Christov, P.P. , Kozekova, A. , Rizzo, C.J. , Stone, M.P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

3t5k
Literature

Ternary complex of hne adduct modified dna (5'-txg-3' vs 14-mer) with dpo4 and incoming ddtp

Banerjee, S. , Christov, P.P. , Kozekova, A. , Rizzo, C.J. , Stone, M.P.

Primary Citation of Related Structures: 3T5K


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 341 Mycobacterium Avium Subsp. Hominissuis 3388 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*AP*TP*(HN0)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') b 17 NA CATXGAATCCTTCCCCC
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3') c 14 NA GGGGGAAGGATTCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-07-27
Deposition Author(s): Banerjee, S. , Christov, P.P. , Kozekova, A. , Rizzo, C.J. , Stone, M.P.