Crystal structure of a methyl-coenzyme m reductase purified from black sea mats
PDB DOI: 10.2210/pdb3sqg/pdb
Classification: TRANSFERASE
Organism(s): Uncultured Archaeon
Deposited: 2011-07-05
Deposition Author(s): Demmer, U. , Ermler, U. , Krueger, M. , Shima, S. , Thauer, R.K. , Weinert, T.
Crystal structure of a methyl-coenzyme m reductase purified from black sea mats
Demmer, U. , Ermler, U. , Krueger, M. , Shima, S. , Thauer, R.K. , Weinert, T.
Primary Citation of Related Structures: 3SQG
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Methyl coenzyme M reductase, alpha subunit | A | 579 | Uncultured Archaeon | MPYNDIQHNFLKAMSDKFAEKPESTATEFYTYGGIAQKGGMRKREFIAEASKIVDSRVNSTPAYNPDAGMPQGQRYLMPYMMNHTDIMVNADDLHWINNAAMQQAWDDMKRGIVLGLDDAHGLLEARLGKEVTPDTISNYMEVLNHALPGGAVIQEHMVETKPMLVNDSYAKIFSGDDDLVDSVDRRFILDINKEFAAGYDKPGEQADQLKDAIGKKIWQILWMPTVVARQTDGGTMFRWVGMQVGMTMINAYKLCAGESVTGEFAYYAKHAAVVQLSNYMPVKRARSHNEPGGMPLGINADSTRSPALFPNDPIRAELESIAVAAMVYDQLWFGTYMSGGVGFTQYASATYTDNILEDFCYKGCEIGLDYAGGKMASIKGDKLNMDILEEIIRAENDYALTQYEAYPTVAESHFGGSVRACCAAAGCGSAVACATGLAQPALSAWSLSMLGHYERVGRLGFFGYDLQDQCTACGSYSYQSDEGMPFEMRGVNYPNYAMNVGHQSAYAGLVAGAHSANHDAWVLSPLWKVAFSDRDLPFDRGYVTREYGLGANREYTKVAGERDLIIAGHYGREPGAKL |
Methyl coenzyme M reductase, alpha subunit | D | 579 | Uncultured Archaeon | MPYNDIQHNFLKAMSDKFAEKPESTATEFYTYGGIAQKGGMRKREFIAEASKIVDSRVNSTPAYNPDAGMPQGQRYLMPYMMNHTDIMVNADDLHWINNAAMQQAWDDMKRGIVLGLDDAHGLLEARLGKEVTPDTISNYMEVLNHALPGGAVIQEHMVETKPMLVNDSYAKIFSGDDDLVDSVDRRFILDINKEFAAGYDKPGEQADQLKDAIGKKIWQILWMPTVVARQTDGGTMFRWVGMQVGMTMINAYKLCAGESVTGEFAYYAKHAAVVQLSNYMPVKRARSHNEPGGMPLGINADSTRSPALFPNDPIRAELESIAVAAMVYDQLWFGTYMSGGVGFTQYASATYTDNILEDFCYKGCEIGLDYAGGKMASIKGDKLNMDILEEIIRAENDYALTQYEAYPTVAESHFGGSVRACCAAAGCGSAVACATGLAQPALSAWSLSMLGHYERVGRLGFFGYDLQDQCTACGSYSYQSDEGMPFEMRGVNYPNYAMNVGHQSAYAGLVAGAHSANHDAWVLSPLWKVAFSDRDLPFDRGYVTREYGLGANREYTKVAGERDLIIAGHYGREPGAKL |
Methyl coenzyme M reductase, alpha subunit | G | 579 | Uncultured Archaeon | MPYNDIQHNFLKAMSDKFAEKPESTATEFYTYGGIAQKGGMRKREFIAEASKIVDSRVNSTPAYNPDAGMPQGQRYLMPYMMNHTDIMVNADDLHWINNAAMQQAWDDMKRGIVLGLDDAHGLLEARLGKEVTPDTISNYMEVLNHALPGGAVIQEHMVETKPMLVNDSYAKIFSGDDDLVDSVDRRFILDINKEFAAGYDKPGEQADQLKDAIGKKIWQILWMPTVVARQTDGGTMFRWVGMQVGMTMINAYKLCAGESVTGEFAYYAKHAAVVQLSNYMPVKRARSHNEPGGMPLGINADSTRSPALFPNDPIRAELESIAVAAMVYDQLWFGTYMSGGVGFTQYASATYTDNILEDFCYKGCEIGLDYAGGKMASIKGDKLNMDILEEIIRAENDYALTQYEAYPTVAESHFGGSVRACCAAAGCGSAVACATGLAQPALSAWSLSMLGHYERVGRLGFFGYDLQDQCTACGSYSYQSDEGMPFEMRGVNYPNYAMNVGHQSAYAGLVAGAHSANHDAWVLSPLWKVAFSDRDLPFDRGYVTREYGLGANREYTKVAGERDLIIAGHYGREPGAKL |
Methyl-coenzyme M reductase, beta subunit | B | 433 | Uncultured Archaeon | MADEIDLYDDKGKKLAAGVPLQNISPLKNAAIKKIVNLTIRTGAVDLAGLEKKFATGAIAGRGMVIRGVNRNLPIVDKAKEIAKAVEDMLRVESGDDTNVELIAGGKRMMVQPPTARILSDYSVGLTASMGALTHAIIDVCNVSMWDAPYVHAGVWGMYPQNPDPGDGAVKMLVDIPMKNEGPGFTLRNIPVNHLAATVRKRAMQGAGLTMILEEAAQFEMGNCMGPHERGHLLDLAYEGLNANNLLYSLIKDNGQDGSLGDVIYAAVEKAKADGVIKSLKKMPSGFTVYDADDMQLWNAYACTAMLAGVCVNCASMRAGQPVPGNIMQACCLIERETGLPGPDFGMAQGASVSSSFFSHSIYGGGGPGVFYGNHIVTRHAKGQFIPCFCAAMCIDADTMYFSPARTSALYGEVLGAIPEFAEPMRAVAEAAK |
Methyl-coenzyme M reductase, beta subunit | E | 433 | Uncultured Archaeon | MADEIDLYDDKGKKLAAGVPLQNISPLKNAAIKKIVNLTIRTGAVDLAGLEKKFATGAIAGRGMVIRGVNRNLPIVDKAKEIAKAVEDMLRVESGDDTNVELIAGGKRMMVQPPTARILSDYSVGLTASMGALTHAIIDVCNVSMWDAPYVHAGVWGMYPQNPDPGDGAVKMLVDIPMKNEGPGFTLRNIPVNHLAATVRKRAMQGAGLTMILEEAAQFEMGNCMGPHERGHLLDLAYEGLNANNLLYSLIKDNGQDGSLGDVIYAAVEKAKADGVIKSLKKMPSGFTVYDADDMQLWNAYACTAMLAGVCVNCASMRAGQPVPGNIMQACCLIERETGLPGPDFGMAQGASVSSSFFSHSIYGGGGPGVFYGNHIVTRHAKGQFIPCFCAAMCIDADTMYFSPARTSALYGEVLGAIPEFAEPMRAVAEAAK |
Methyl-coenzyme M reductase, beta subunit | H | 433 | Uncultured Archaeon | MADEIDLYDDKGKKLAAGVPLQNISPLKNAAIKKIVNLTIRTGAVDLAGLEKKFATGAIAGRGMVIRGVNRNLPIVDKAKEIAKAVEDMLRVESGDDTNVELIAGGKRMMVQPPTARILSDYSVGLTASMGALTHAIIDVCNVSMWDAPYVHAGVWGMYPQNPDPGDGAVKMLVDIPMKNEGPGFTLRNIPVNHLAATVRKRAMQGAGLTMILEEAAQFEMGNCMGPHERGHLLDLAYEGLNANNLLYSLIKDNGQDGSLGDVIYAAVEKAKADGVIKSLKKMPSGFTVYDADDMQLWNAYACTAMLAGVCVNCASMRAGQPVPGNIMQACCLIERETGLPGPDFGMAQGASVSSSFFSHSIYGGGGPGVFYGNHIVTRHAKGQFIPCFCAAMCIDADTMYFSPARTSALYGEVLGAIPEFAEPMRAVAEAAK |
Methyl-coenzyme M reductase, gamma subunit | C | 279 | Uncultured Archaeon | MPQFTAGNSHVAQNRRNYMDPSYKLEKLRDIPEEDIVRLLAHRAPGEEYKSIHPPLEEMEEPDCAVRQIVKPTEGAAAGDRIRYVQYTDSMFFSPITPYQRAWEALNRYKGVDPGVLSGRTIIEARERDIEKIAKIEVDCELYDTARTGLRGRTVHGHAVRLDKDGMMFDALRRWSRGADGTVTYVKDMIGGAMDKEVTLGKPLSDAELLKKTTMYRNAQGGVWQEADDPESMDVTAQIHWKRSVGGFQPWAKMKDIKGGKKDVGVKNLKLFTPRGGVE |
Methyl-coenzyme M reductase, gamma subunit | F | 279 | Uncultured Archaeon | MPQFTAGNSHVAQNRRNYMDPSYKLEKLRDIPEEDIVRLLAHRAPGEEYKSIHPPLEEMEEPDCAVRQIVKPTEGAAAGDRIRYVQYTDSMFFSPITPYQRAWEALNRYKGVDPGVLSGRTIIEARERDIEKIAKIEVDCELYDTARTGLRGRTVHGHAVRLDKDGMMFDALRRWSRGADGTVTYVKDMIGGAMDKEVTLGKPLSDAELLKKTTMYRNAQGGVWQEADDPESMDVTAQIHWKRSVGGFQPWAKMKDIKGGKKDVGVKNLKLFTPRGGVE |
Methyl-coenzyme M reductase, gamma subunit | I | 279 | Uncultured Archaeon | MPQFTAGNSHVAQNRRNYMDPSYKLEKLRDIPEEDIVRLLAHRAPGEEYKSIHPPLEEMEEPDCAVRQIVKPTEGAAAGDRIRYVQYTDSMFFSPITPYQRAWEALNRYKGVDPGVLSGRTIIEARERDIEKIAKIEVDCELYDTARTGLRGRTVHGHAVRLDKDGMMFDALRRWSRGADGTVTYVKDMIGGAMDKEVTLGKPLSDAELLKKTTMYRNAQGGVWQEADDPESMDVTAQIHWKRSVGGFQPWAKMKDIKGGKKDVGVKNLKLFTPRGGVE |
Method: X-RAY DIFFRACTION
Deposited Date: 2011-07-05
Deposition Author(s): Demmer, U. , Ermler, U. , Krueger, M. , Shima, S. , Thauer, R.K. , Weinert, T.