PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3RB3

Dpo4 extension ternary complex with 3'-terminal primer a base opposite the 1-methylguanine (m1g) lesion

PDB DOI: 10.2210/pdb3rb3/pdb

Classification: TRANSFERASE/DNA
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2011-03-28
Deposition Author(s): Patel, D.J. , Rechkoblit, O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

Literature

Dpo4 extension ternary complex with 3'-terminal primer a base opposite the 1-methylguanine (m1g) lesion

Patel, D.J. , Rechkoblit, O.

Primary Citation of Related Structures: 3RB3


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 341 Sulfolobus Solfataricus , Synthetic Construct GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3') d 13 NA GTTGGATGGTAGA
DNA (5'-D(*C*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3') e 20 NA CCTAACGCTACCATCCAACC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-03-28
Deposition Author(s): Patel, D.J. , Rechkoblit, O.