PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3R8F

Replication initiator dnaa bound to amppcp and single-stranded dna

PDB DOI: 10.2210/pdb3r8f/pdb

Classification: REPLICATION ACTIVATOR/DNA
Organism(s): Aquifex Aeolicus , Synthetic Construct

Deposited: 2011-03-23
Deposition Author(s): Berger, J.M. , Chuang, K. , Duderstadt, K.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.366 Å

3r8f
Literature

Replication initiator dnaa bound to amppcp and single-stranded dna

Berger, J.M. , Chuang, K. , Duderstadt, K.E.

Primary Citation of Related Structures: 3R8F


Proteins
Molecule Chains Sequence Length Organism Sequence
Chromosomal replication initiator protein dnaA A 324 Aquifex Aeolicus , Synthetic Construct KDFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQAFDKIC
Chromosomal replication initiator protein dnaA B 324 Aquifex Aeolicus , Synthetic Construct KDFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQAFDKIC
Chromosomal replication initiator protein dnaA C 324 Aquifex Aeolicus , Synthetic Construct KDFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQAFDKIC
Chromosomal replication initiator protein dnaA D 324 Aquifex Aeolicus , Synthetic Construct KDFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQAFDKIC

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3' e 12 NA AAAAAAAAAAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-03-23
Deposition Author(s): Berger, J.M. , Chuang, K. , Duderstadt, K.E.