3QE9
Crystal structure of human exonuclease 1 exo1 (d173a) in complex with dna (complex i)
PDB DOI: 10.2210/pdb3qe9/pdb
Classification: HYDROLASE/DNA Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2011-01-20 Deposition Author(s): Beese, L.S. , Hast, M.A. , Hellinga, H.W. , Iyer, R.R. , Mcsweeney, E.A. , Modrich, P. , Orans, J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.51 Å
Crystal structure of human exonuclease 1 exo1 (d173a) in complex with dna (complex i)
Beese, L.S. , Hast, M.A. , Hellinga, H.W. , Iyer, R.R. , Mcsweeney, E.A. , Modrich, P. , Orans, J.
Primary Citation of Related Structures: 3QE9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Exonuclease 1 | Y | 352 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFTRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSALLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNAYEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSR |
| Exonuclease 1 | Z | 352 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFTRSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSALLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNAYEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSR |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3') | c | 13 | NA | CGCTAGTCGACAT |
| DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*AP*CP*AP*T)-3') | a | 13 | NA | CGCTAGTCGACAT |
| DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3') | d | 10 | NA | TCGACTAGCG |
| DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3') | b | 10 | NA | TCGACTAGCG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-01-20 Deposition Author(s): Beese, L.S. , Hast, M.A. , Hellinga, H.W. , Iyer, R.R. , Mcsweeney, E.A. , Modrich, P. , Orans, J.