3Q8M
Crystal structure of human flap endonuclease fen1 (d181a) in complex with substrate 5'-flap dna and k+
PDB DOI: 10.2210/pdb3q8m/pdb
Classification: HYDROLASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2011-01-06 Deposition Author(s): Arvai, A. , Chapados, B.R. , Classen, S. , Cooper, P.K. , Finger, D.L. , Grasby, J.A. , Guenther, G. , Sarker, A.H. , Shen, B. , Tainer, J.A. , Thompson, P. , Tomlinson, C.G. , Tsutakawa, S.E.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.6 Å
Crystal structure of human flap endonuclease fen1 (d181a) in complex with substrate 5'-flap dna and k+
Arvai, A. , Chapados, B.R. , Classen, S. , Cooper, P.K. , Finger, D.L. , Grasby, J.A. , Guenther, G. , Sarker, A.H. , Shen, B. , Tainer, J.A. , Thompson, P. , Tomlinson, C.G. , Tsutakawa, S.E.
Primary Citation of Related Structures: 3Q8M
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Flap endonuclease 1 | A | 341 | Homo Sapiens , Synthetic Construct | GIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMACLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAHQLFLEPEVLDPESVELKWSEPNEEELIKFMCGEKQFSEERIRSGVKRLSKSRQGSTLEVLFQ |
| Flap endonuclease 1 | B | 341 | Homo Sapiens , Synthetic Construct | GIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMACLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAHQLFLEPEVLDPESVELKWSEPNEEELIKFMCGEKQFSEERIRSGVKRLSKSRQGSTLEVLFQ |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3') | d | 18 | NA | ACTCTGCCTCAAGACGGT |
| DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3') | g | 18 | NA | ACTCTGCCTCAAGACGGT |
| DNA (5'-D(*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3') | e | 12 | NA | TTGAGGCAGAGT |
| DNA (5'-D(*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3') | h | 12 | NA | TTGAGGCAGAGT |
| DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3') | f | 7 | NA | ACCGTCC |
| DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3') | i | 7 | NA | ACCGTCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-01-06 Deposition Author(s): Arvai, A. , Chapados, B.R. , Classen, S. , Cooper, P.K. , Finger, D.L. , Grasby, J.A. , Guenther, G. , Sarker, A.H. , Shen, B. , Tainer, J.A. , Thompson, P. , Tomlinson, C.G. , Tsutakawa, S.E.