3Q4K
Structure of a small peptide ligand bound to e.coli dna sliding clamp
PDB DOI: 10.2210/pdb3q4k/pdb
Classification: transferase/transferase inhibitor Organism(s): Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2010-12-23 Deposition Author(s): Briand, J.P. , Burnouf, D. , Chaloin, O. , Dejaegere, A. , Dumas, P. , Ennifar, E. , Guichard, G. , Olieric, V. , Wagner, J. , Wolff, P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.6 Å
Structure of a small peptide ligand bound to e.coli dna sliding clamp
Briand, J.P. , Burnouf, D. , Chaloin, O. , Dejaegere, A. , Dumas, P. , Ennifar, E. , Guichard, G. , Olieric, V. , Wagner, J. , Wolff, P.
Primary Citation of Related Structures: 3Q4K
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase III subunit beta | A | 366 | Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL |
| DNA polymerase III subunit beta | B | 366 | Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL |
| peptide ligand | C | 6 | Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | XQADLF |
| peptide ligand | D | 6 | Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | XQADLF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2010-12-23 Deposition Author(s): Briand, J.P. , Burnouf, D. , Chaloin, O. , Dejaegere, A. , Dumas, P. , Ennifar, E. , Guichard, G. , Olieric, V. , Wagner, J. , Wolff, P.