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3PY8

Crystal structure of a mutant of the large fragment of dna polymerase i from thermus aquaticus in a closed ternary complex with dna and ddctp

PDB DOI: 10.2210/pdb3py8/pdb

Classification: Transferase/DNA
Organism(s): Thermus Aquaticus , Synthetic Construct

Deposited: 2010-12-12
Deposition Author(s): Diederichs, K. , Marx, A. , Schnur, A. , Welte, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.74 Å

3py8
Literature

Crystal structure of a mutant of the large fragment of dna polymerase i from thermus aquaticus in a closed ternary complex with dna and ddctp

Diederichs, K. , Marx, A. , Schnur, A. , Welte, W.

Primary Citation of Related Structures: 3PY8


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase I A 540 Thermus Aquaticus , Synthetic Construct ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQKELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERKAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3') b 12 NA GACCACGGCGCC
DNA (5'-D(*AP*A*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') c 16 NA AAAGGGCGCCGTGGTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-12-12
Deposition Author(s): Diederichs, K. , Marx, A. , Schnur, A. , Welte, W.