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3PW7

Ternary complex of aflatoxin b1 adduct modified dna (afb1-n7-gua) with dna polymerase iv and incoming dctp

PDB DOI: 10.2210/pdb3pw7/pdb

Classification: Transferase/DNA
Organism(s): Paramecium Tetraurelia Strain D4-2 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2010-12-07
Deposition Author(s): Banerjee, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

3pw7
Literature

Ternary complex of aflatoxin b1 adduct modified dna (afb1-n7-gua) with dna polymerase iv and incoming dctp

Banerjee, S.

Primary Citation of Related Structures: 3PW7


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 347 Paramecium Tetraurelia Strain D4-2 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI
DNA polymerase IV E 347 Paramecium Tetraurelia Strain D4-2 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') b 16 NA ATTGAATCCTTCCCCC
DNA (5'-D(*AP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') f 16 NA ATTGAATCCTTCCCCC
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3') c 12 NA GGGGGAAGGATT
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3') g 12 NA GGGGGAAGGATT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-12-07
Deposition Author(s): Banerjee, S.