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FASTA Sequence PDB Format mmCIF Format
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3PQY

Crystal structure of 6218 tcr in complex with the h2db-pa224

PDB DOI: 10.2210/pdb3pqy/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct

Deposited: 2010-11-28
Deposition Author(s): Gras, S. , Guillonneau, C. , Rossjohn, J. , Turner, S.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.192 Å

3pqy
Literature

Crystal structure of 6218 tcr in complex with the h2db-pa224

Gras, S. , Guillonneau, C. , Rossjohn, J. , Turner, S.J.

Primary Citation of Related Structures: 3PQY


Proteins
Molecule Chains Sequence Length Organism Sequence
H-2 class I histocompatibility antigen, D-B alpha chain A 275 Homo Sapiens , Mus Musculus , Synthetic Construct PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
H-2 class I histocompatibility antigen, D-B alpha chain F 275 Homo Sapiens , Mus Musculus , Synthetic Construct PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
H-2 class I histocompatibility antigen, D-B alpha chain K 275 Homo Sapiens , Mus Musculus , Synthetic Construct PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
H-2 class I histocompatibility antigen, D-B alpha chain P 275 Homo Sapiens , Mus Musculus , Synthetic Construct PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
Beta-2-microglobulin B 99 Homo Sapiens , Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Beta-2-microglobulin G 99 Homo Sapiens , Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Beta-2-microglobulin L 99 Homo Sapiens , Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Beta-2-microglobulin Q 99 Homo Sapiens , Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
10-mer peptide from RNA-directed RNA polymerase C 10 Homo Sapiens , Mus Musculus , Synthetic Construct SSLENFRAYV
10-mer peptide from RNA-directed RNA polymerase H 10 Homo Sapiens , Mus Musculus , Synthetic Construct SSLENFRAYV
10-mer peptide from RNA-directed RNA polymerase M 10 Homo Sapiens , Mus Musculus , Synthetic Construct SSLENFRAYV
10-mer peptide from RNA-directed RNA polymerase R 10 Homo Sapiens , Mus Musculus , Synthetic Construct SSLENFRAYV
T cell receptor alpha variable 21-DV12,T-cell receptor, sp3.4 alpha chain D 195 Homo Sapiens , Mus Musculus , Synthetic Construct KTTQPDSMESTEGETVHLPCSHATISGNEYIYWYRQVPLQGPEYVTHGLQQNTTNSMAFLAIASDRKSSTLILPHVSLRDAAVYHCILSGGSNYKLTFGKGTLLTVTPIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFF
T cell receptor alpha variable 21-DV12,T-cell receptor, sp3.4 alpha chain I 195 Homo Sapiens , Mus Musculus , Synthetic Construct KTTQPDSMESTEGETVHLPCSHATISGNEYIYWYRQVPLQGPEYVTHGLQQNTTNSMAFLAIASDRKSSTLILPHVSLRDAAVYHCILSGGSNYKLTFGKGTLLTVTPIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFF
T cell receptor alpha variable 21-DV12,T-cell receptor, sp3.4 alpha chain N 195 Homo Sapiens , Mus Musculus , Synthetic Construct KTTQPDSMESTEGETVHLPCSHATISGNEYIYWYRQVPLQGPEYVTHGLQQNTTNSMAFLAIASDRKSSTLILPHVSLRDAAVYHCILSGGSNYKLTFGKGTLLTVTPIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFF
T cell receptor alpha variable 21-DV12,T-cell receptor, sp3.4 alpha chain S 195 Homo Sapiens , Mus Musculus , Synthetic Construct KTTQPDSMESTEGETVHLPCSHATISGNEYIYWYRQVPLQGPEYVTHGLQQNTTNSMAFLAIASDRKSSTLILPHVSLRDAAVYHCILSGGSNYKLTFGKGTLLTVTPIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFF
T cell receptor beta, variable 29,Human nkt tcr beta chain E 240 Homo Sapiens , Mus Musculus , Synthetic Construct DMKVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEGDIPKGYRVSRKKREHFSLILDSAKTNQTSVYFCASSFGREQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T cell receptor beta, variable 29,Human nkt tcr beta chain J 240 Homo Sapiens , Mus Musculus , Synthetic Construct DMKVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEGDIPKGYRVSRKKREHFSLILDSAKTNQTSVYFCASSFGREQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T cell receptor beta, variable 29,Human nkt tcr beta chain O 240 Homo Sapiens , Mus Musculus , Synthetic Construct DMKVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEGDIPKGYRVSRKKREHFSLILDSAKTNQTSVYFCASSFGREQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T cell receptor beta, variable 29,Human nkt tcr beta chain T 240 Homo Sapiens , Mus Musculus , Synthetic Construct DMKVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEGDIPKGYRVSRKKREHFSLILDSAKTNQTSVYFCASSFGREQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-11-28
Deposition Author(s): Gras, S. , Guillonneau, C. , Rossjohn, J. , Turner, S.J.