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FASTA Sequence PDB Format mmCIF Format
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3PLA

Crystal structure of a catalytically active substrate-bound box c/d rnp from sulfolobus solfataricus

PDB DOI: 10.2210/pdb3pla/pdb

Classification: TRANSFERASE/RNA
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2010-11-15
Deposition Author(s): Jia, R. , Lai, S. , Lin, J. , Lu, J. , Xu, A. , Ye, K. , Zhang, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.15 Å

Literature

Crystal structure of a catalytically active substrate-bound box c/d rnp from sulfolobus solfataricus

Jia, R. , Lai, S. , Lin, J. , Lu, J. , Xu, A. , Ye, K. , Zhang, L.

Primary Citation of Related Structures: 3PLA


Proteins
Molecule Chains Sequence Length Organism Sequence
Pre mRNA splicing protein A 388 Sulfolobus Solfataricus , Synthetic Construct MVKIYLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNNEKGIPFSATVELLKKVNPQEVVVENEAEVPKLQALGYRVSYEPYSKVSRIFRESLPKVAIDIKFASNEEDYYNFLHELSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFSGRFIGDQLNEQLKKRIDEIKEKFAQHHHHHHHH
Pre mRNA splicing protein B 388 Sulfolobus Solfataricus , Synthetic Construct MVKIYLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNNEKGIPFSATVELLKKVNPQEVVVENEAEVPKLQALGYRVSYEPYSKVSRIFRESLPKVAIDIKFASNEEDYYNFLHELSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFSGRFIGDQLNEQLKKRIDEIKEKFAQHHHHHHHH
Pre mRNA splicing protein K 388 Sulfolobus Solfataricus , Synthetic Construct MVKIYLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNNEKGIPFSATVELLKKVNPQEVVVENEAEVPKLQALGYRVSYEPYSKVSRIFRESLPKVAIDIKFASNEEDYYNFLHELSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFSGRFIGDQLNEQLKKRIDEIKEKFAQHHHHHHHH
50S ribosomal protein L7Ae C 130 Sulfolobus Solfataricus , Synthetic Construct MDAMSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIIKRVNEIKGKTSS
50S ribosomal protein L7Ae D 130 Sulfolobus Solfataricus , Synthetic Construct MDAMSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIIKRVNEIKGKTSS
50S ribosomal protein L7Ae L 130 Sulfolobus Solfataricus , Synthetic Construct MDAMSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIIKRVNEIKGKTSS
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase E 232 Sulfolobus Solfataricus , Synthetic Construct MAEVITVKQTNMENIYECEFNDGSFRLCTRNLVPNFNVYGERLIKYEGVEYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYKG
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase F 232 Sulfolobus Solfataricus , Synthetic Construct MAEVITVKQTNMENIYECEFNDGSFRLCTRNLVPNFNVYGERLIKYEGVEYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYKG
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase M 232 Sulfolobus Solfataricus , Synthetic Construct MAEVITVKQTNMENIYECEFNDGSFRLCTRNLVPNFNVYGERLIKYEGVEYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYKG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
C/D guide RNA g 40 NA GGGAGUCUUGUGAUGAAACACUCAUGGUCUGAAGACUCCC
C/D guide RNA h 40 NA GGGAGUCUUGUGAUGAAACACUCAUGGUCUGAAGACUCCC
C/D guide RNA n 40 NA GGGAGUCUUGUGAUGAAACACUCAUGGUCUGAAGACUCCC
RNA (5'-R(*CP*CP*AP*UP*GP*AP*GP*UP*GP*U)-3') i 10 NA CCAUGAGUGU
RNA (5'-R(*CP*CP*AP*UP*GP*AP*GP*UP*GP*U)-3') j 10 NA CCAUGAGUGU
RNA (5'-R(*CP*CP*AP*UP*GP*AP*GP*UP*GP*U)-3') o 10 NA CCAUGAGUGU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-11-15
Deposition Author(s): Jia, R. , Lai, S. , Lin, J. , Lu, J. , Xu, A. , Ye, K. , Zhang, L.