PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3PKM

Crystal structure of cas6 with its substrate rna

PDB DOI: 10.2210/pdb3pkm/pdb

Classification: HYDROLASE/RNA
Organism(s): Pyrococcus Furiosus , Synthetic Construct

Deposited: 2010-11-11
Deposition Author(s): Li, H. , Preamplume, G. , Wang, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.103 Å

Literature

Crystal structure of cas6 with its substrate rna

Li, H. , Preamplume, G. , Wang, R.

Primary Citation of Related Structures: 3PKM


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endoribonuclease Cas6 A 269 Pyrococcus Furiosus , Synthetic Construct HHHHGSRFLIRLVPEDKDRAFKVPYNHQYYLQGLIYNAIKSSNPKLATYLHEVKGPKLFTYSLFMAEKREHPKGLPYFLGYKKGFFYFSTCVPEIAEALVNGLLMNPEVRLWDERFYLHEIKVLREPKKFNGSTFVTLSPIAVTVVRKGKSYDVPPMEKEFYSIIKDDLQDKYVMAYGDKPPSEFEMEVLIAKPKRFRIKPGIYQTAWHLVFRAYGNDDLLKVGYEVGFGEKNSLGFGMVKVEGNKTTKEAEEQEKITFNSREELKTGV
CRISPR-associated endoribonuclease Cas6 X 269 Pyrococcus Furiosus , Synthetic Construct HHHHGSRFLIRLVPEDKDRAFKVPYNHQYYLQGLIYNAIKSSNPKLATYLHEVKGPKLFTYSLFMAEKREHPKGLPYFLGYKKGFFYFSTCVPEIAEALVNGLLMNPEVRLWDERFYLHEIKVLREPKKFNGSTFVTLSPIAVTVVRKGKSYDVPPMEKEFYSIIKDDLQDKYVMAYGDKPPSEFEMEVLIAKPKRFRIKPGIYQTAWHLVFRAYGNDDLLKVGYEVGFGEKNSLGFGMVKVEGNKTTKEAEEQEKITFNSREELKTGV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-R(*AP*UP*UP*AP*CP*AP*AP*UP*AP*A)-3' g 10 NA AUUACAAUAA
5'-R(P*UP*UP*AP*CP*AP*AP*UP*AP*A)-3' r 9 NA UUACAAUAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-11-11
Deposition Author(s): Li, H. , Preamplume, G. , Wang, R.