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3PGD

Crystal structure of hla-dr1 with clip106-120, canonical peptide orientation

PDB DOI: 10.2210/pdb3pgd/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2010-11-01
Deposition Author(s): Falk, K. , Freund, C. , Gunther, S. , Heinemann, U. , Jung, G. , Roske, Y. , Rotzschke, O. , Schlundt, A. , Sticht, J. , Wiesmuller, K.-H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.72 Å

3pgd
Literature

Crystal structure of hla-dr1 with clip106-120, canonical peptide orientation

Falk, K. , Freund, C. , Gunther, S. , Heinemann, U. , Jung, G. , Roske, Y. , Rotzschke, O. , Schlundt, A. , Sticht, J. , Wiesmuller, K.-H.

Primary Citation of Related Structures: 3PGD


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class II histocompatibility antigen, DR alpha chain A 193 Homo Sapiens , Synthetic Construct MIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTEN
HLA class II histocompatibility antigen, DR alpha chain D 193 Homo Sapiens , Synthetic Construct MIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTEN
HLA class II histocompatibility antigen, DRB1-1 beta chain B 199 Homo Sapiens , Synthetic Construct MGDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSESAQSK
HLA class II histocompatibility antigen, DRB1-1 beta chain E 199 Homo Sapiens , Synthetic Construct MGDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSESAQSK
HLA class II histocompatibility antigen gamma chain C 15 Homo Sapiens , Synthetic Construct KMRMATPLLMQALPM
HLA class II histocompatibility antigen gamma chain F 15 Homo Sapiens , Synthetic Construct KMRMATPLLMQALPM
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-11-01
Deposition Author(s): Falk, K. , Freund, C. , Gunther, S. , Heinemann, U. , Jung, G. , Roske, Y. , Rotzschke, O. , Schlundt, A. , Sticht, J. , Wiesmuller, K.-H.