3PCQ
Femtosecond x-ray protein nanocrystallography
PDB DOI: 10.2210/pdb3pcq/pdb
Classification: PHOTOSYNTHESIS Organism(s): Thermosynechococcus Elongatus
Deposited: 2010-10-21 Deposition Author(s): Adolph, M. , Andersson, I. , Andreasson, J. , Andritschke, R. , Aquila, A. , Bajt, S. , Barends, T.R.M. , Barthelmess, M. , Barty, A. , Bogan, M.J. , Bostedt, C. , Bott, M. , Boutet, S. , Bozek, J.D. , Caleman, C. , Chapman, H.N. , Coppola, N. , Deponte, D.P. , Doak, R.B. , Epp, S.W. , Erk, B. , Foucar, L. , Frank, M. , Fromme, P. , Fromme, R. , Gorke, H. , Gorkhover, T. , Graafsma, H. , Grotjohann, I. , Gumprecht, L. , Hajdu, J. , Hampton, C.Y. , Hartmann, R. , Hau-Riege, S.P. , Hauser, G. , Herrmann, S. , Hirsemann, H. , Holl, P. , Holton, J.M. , Homke, A. , Hunter, M.S. , Jonsson, O. , Kimmel, N. , Kirian, R.A. , Krasniqi, F. , Krzywinski, J. , Kuhnel, K.-U. , Liang, M. , Lomb, L. , Maia, F.R.N.C. , Marchesini, S. , Martin, A.V. , Messerschmidt, M. , Nass, K. , Neutze, R. , Nilsson, B. , Pietschner, D. , Potdevin, G. , Reich, C. , Rocker, A. , Rolles, D. , Rudek, B. , Rudenko, A. , Rupp, D. , Schaller, G. , Schlichting, I. , Schmidt, C. , Schmidt, K.E. , Schopper, F. , Schorb, S. , Schroter, C.-D. , Schulz, J. , Seibert, M.M. , Shoeman, R.L. , Sierra, R. , Soltau, H. , Spence, J.C.H. , Starodub, D. , Stern, S. , Struder, L. , Svenda, M. , Timneanu, N. , Ullrich, J. , Wang, X. , Weidenspointner, G. , Weierstall, U. , White, T.A. , Williams, G.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 8.984 Å
Femtosecond x-ray protein nanocrystallography
Adolph, M. , Andersson, I. , Andreasson, J. , Andritschke, R. , Aquila, A. , Bajt, S. , Barends, T.R.M. , Barthelmess, M. , Barty, A. , Bogan, M.J. , Bostedt, C. , Bott, M. , Boutet, S. , Bozek, J.D. , Caleman, C. , Chapman, H.N. , Coppola, N. , Deponte, D.P. , Doak, R.B. , Epp, S.W. , Erk, B. , Foucar, L. , Frank, M. , Fromme, P. , Fromme, R. , Gorke, H. , Gorkhover, T. , Graafsma, H. , Grotjohann, I. , Gumprecht, L. , Hajdu, J. , Hampton, C.Y. , Hartmann, R. , Hau-Riege, S.P. , Hauser, G. , Herrmann, S. , Hirsemann, H. , Holl, P. , Holton, J.M. , Homke, A. , Hunter, M.S. , Jonsson, O. , Kimmel, N. , Kirian, R.A. , Krasniqi, F. , Krzywinski, J. , Kuhnel, K.-U. , Liang, M. , Lomb, L. , Maia, F.R.N.C. , Marchesini, S. , Martin, A.V. , Messerschmidt, M. , Nass, K. , Neutze, R. , Nilsson, B. , Pietschner, D. , Potdevin, G. , Reich, C. , Rocker, A. , Rolles, D. , Rudek, B. , Rudenko, A. , Rupp, D. , Schaller, G. , Schlichting, I. , Schmidt, C. , Schmidt, K.E. , Schopper, F. , Schorb, S. , Schroter, C.-D. , Schulz, J. , Seibert, M.M. , Shoeman, R.L. , Sierra, R. , Soltau, H. , Spence, J.C.H. , Starodub, D. , Stern, S. , Struder, L. , Svenda, M. , Timneanu, N. , Ullrich, J. , Wang, X. , Weidenspointner, G. , Weierstall, U. , White, T.A. , Williams, G.J.
Primary Citation of Related Structures: 3PCQ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem I P700 chlorophyll a apoprotein A1 | A | 755 | Thermosynechococcus Elongatus | MTISPPEREPKVRVVVDNDPVPTSFEKWAKPGHFDRTLARGPQTTTWIWNLHALAHDFDTHTSDLEDISRKIFSAHFGHLAVVFIWLSGMYFHGAKFSNYEAWLADPTGIKPSAQVVWPIVGQGILNGDVGGGFHGIQITSGLFQLWRASGITNEFQLYCTAIGGLVMAGLMLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVSLPINKLLDAGVAAKDIPLPHEFILNPSLMAELYPKVDWGFFSGVIPFFTFNWAAYSDFLTFNGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMYRTNWGIGHSLKEILEAHKGPFTGAGHKGLYEVLTTSWHAQLAINLAMMGSLSIIVAQHMYAMPPYPYLATDYPTQLSLFTHHMWIGGFLVVGGAAHGAIFMVRDYDPAMNQNNVLDRVLRHRDAIISHLNWVCIFLGFHSFGLYVHNDTMRAFGRPQDMFSDTGIQLQPVFAQWVQNLHTLAPGGTAPNAAATASVAFGGDVVAVGGKVAMMPIVLGTADFMVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISVVIFHFSWKMQSDVWGTVAPDGTVSHITGGNFAQSAITINGWLRDFLWAQASQVIGSYGSALSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIIQGRAVGVAHYLLGGIATTWAFFLARIISVG |
| Photosystem I reaction center subunit XI | L | 154 | Thermosynechococcus Elongatus | AEELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSSDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLLENFLVVDGIMTGLFN |
| Photosystem I reaction center subunit XII | M | 31 | Thermosynechococcus Elongatus | MALTDTQVYVALVIALLPAVLAFRLSTELYK |
| Photosystem I 4.8K protein | X | 35 | Thermosynechococcus Elongatus | ATKSAKPTYAFRTFWAVLLLAINFLVAAYYFGILK |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 740 | Thermosynechococcus Elongatus | ATKFPKFSQDLAQDPTTRRIWYAIAMAHDFESHDGMTEENLYQKIFASHFGHLAIIFLWVSGSLFHVAWQGNFEQWVQDPVNTRPIAHAIWDPQFGKAAVDAFTQAGASNPVDIAYSGVYHWWYTIGMRTNGDLYQGAIFLLILASLALFAGWLHLQPKFRPSLSWFKNAESRLNHHLAGLFGVSSLAWAGHLIHVAIPESRGQHVGWDNFLSTMPHPAGLAPFFTGNWGVYAQNPDTASHVFGTAQGAGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVLFIVAGHMYRTQFGIGHSIKEMMDAKDFFGTKVEGPFNMPHQGIYETYNNSLHFQLGWHLACLGVITSLVAQHMYSLPPYAFIAQDHTTMAALYTHHQYIAGFLMVGAFAHGAIFLVRDYDPAQNKGNVLDRVLQHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFIQAAHGKLLYGFDTLLSNPDSIASTAWPNYGNVWLPGWLDAINSGTNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYAFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHLGVWEGNVAQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFSVGYILTYAAFLIASTAAKFG |
| Photosystem I iron-sulfur center | C | 80 | Thermosynechococcus Elongatus | AHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY |
| Photosystem I reaction center subunit II | D | 138 | Thermosynechococcus Elongatus | TTLTGQPPLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYDP |
| Photosystem I reaction center subunit IV | E | 75 | Thermosynechococcus Elongatus | VQRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEVAPPKKGK |
| Photosystem I reaction center subunit III | F | 164 | Thermosynechococcus Elongatus | MRRFLALLLVLTLWLGFTPLASADVAGLVPCKDSPAFQKRAAAAVNTTADPASGQKRFERYSQALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEITVSPR |
| Photosystem I reaction center subunit VIII | I | 38 | Thermosynechococcus Elongatus | MMGSYAASFLPWIFIPVVCWLMPTVVMGLLFLYIEGEA |
| Photosystem I reaction center subunit IX | J | 41 | Thermosynechococcus Elongatus | MKHFLTYLSTAPVLAAIWMTITAGILIEFNRFYPDLLFHPL |
| Photosystem I reaction center subunit PsaK | K | 83 | Thermosynechococcus Elongatus | MVLATLPDTTWTPSVGLVVILCNLFAIALGRYAIQSRGKGPGLPIALPALFEGFGLPELLATTSFGHLLAAGVVSGLQYAGAL |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2010-10-21 Deposition Author(s): Adolph, M. , Andersson, I. , Andreasson, J. , Andritschke, R. , Aquila, A. , Bajt, S. , Barends, T.R.M. , Barthelmess, M. , Barty, A. , Bogan, M.J. , Bostedt, C. , Bott, M. , Boutet, S. , Bozek, J.D. , Caleman, C. , Chapman, H.N. , Coppola, N. , Deponte, D.P. , Doak, R.B. , Epp, S.W. , Erk, B. , Foucar, L. , Frank, M. , Fromme, P. , Fromme, R. , Gorke, H. , Gorkhover, T. , Graafsma, H. , Grotjohann, I. , Gumprecht, L. , Hajdu, J. , Hampton, C.Y. , Hartmann, R. , Hau-Riege, S.P. , Hauser, G. , Herrmann, S. , Hirsemann, H. , Holl, P. , Holton, J.M. , Homke, A. , Hunter, M.S. , Jonsson, O. , Kimmel, N. , Kirian, R.A. , Krasniqi, F. , Krzywinski, J. , Kuhnel, K.-U. , Liang, M. , Lomb, L. , Maia, F.R.N.C. , Marchesini, S. , Martin, A.V. , Messerschmidt, M. , Nass, K. , Neutze, R. , Nilsson, B. , Pietschner, D. , Potdevin, G. , Reich, C. , Rocker, A. , Rolles, D. , Rudek, B. , Rudenko, A. , Rupp, D. , Schaller, G. , Schlichting, I. , Schmidt, C. , Schmidt, K.E. , Schopper, F. , Schorb, S. , Schroter, C.-D. , Schulz, J. , Seibert, M.M. , Shoeman, R.L. , Sierra, R. , Soltau, H. , Spence, J.C.H. , Starodub, D. , Stern, S. , Struder, L. , Svenda, M. , Timneanu, N. , Ullrich, J. , Wang, X. , Weidenspointner, G. , Weierstall, U. , White, T.A. , Williams, G.J.