PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3OGD

Alka undamaged dna complex: interrogation of a g*:c base pair

PDB DOI: 10.2210/pdb3ogd/pdb

Classification: HYDROLASE/DNA
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2010-08-16
Deposition Author(s): Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

3ogd
Literature

Alka undamaged dna complex: interrogation of a g*:c base pair

Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.

Primary Citation of Related Structures: 3OGD


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA-3-methyladenine glycosylase 2 A 289 Escherichia Coli , Synthetic Construct MADIGSEFYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQCVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*CP*AP*GP*TP*CP*AP*TP*G)-3' b 9 NA GCAGTCATG
5'-D(*CP*AP*(BRU)P*GP*AP*CP*(BRU)P*GP*C)-3' c 9 NA CAUGACUGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-08-16
Deposition Author(s): Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.