PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3ODH

Structure of okrai/dna complex

PDB DOI: 10.2210/pdb3odh/pdb

Classification: HYDROLASE/DNA
Organism(s): Oceanobacter Kriegii , Synthetic Construct

Deposited: 2010-08-11
Deposition Author(s): Aggarwal, A.K. , Vanamee, E.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

Literature

Structure of okrai/dna complex

Aggarwal, A.K. , Vanamee, E.S.

Primary Citation of Related Structures: 3ODH


Proteins
Molecule Chains Sequence Length Organism Sequence
OkrAI endonuclease A 194 Oceanobacter Kriegii , Synthetic Construct MKIKRIEVLINNGSVPGIPMILNEIQDAIKTVSWPEGNNSFVINPVRKGNGVKPIKNSCMRHLHQKGWALEHPVRIKAEMRPGPLDAVKMIGGKAFALEWETGNISSSHRAINKMVMGMLERVIIGGVLILPSRDMYNYLTDRVGNFRELEPYFSVWRQFNLKDAYLAIVEIEHDSVDAQVSLIPKGTDGRAIR
OkrAI endonuclease B 194 Oceanobacter Kriegii , Synthetic Construct MKIKRIEVLINNGSVPGIPMILNEIQDAIKTVSWPEGNNSFVINPVRKGNGVKPIKNSCMRHLHQKGWALEHPVRIKAEMRPGPLDAVKMIGGKAFALEWETGNISSSHRAINKMVMGMLERVIIGGVLILPSRDMYNYLTDRVGNFRELEPYFSVWRQFNLKDAYLAIVEIEHDSVDAQVSLIPKGTDGRAIR
OkrAI endonuclease E 194 Oceanobacter Kriegii , Synthetic Construct MKIKRIEVLINNGSVPGIPMILNEIQDAIKTVSWPEGNNSFVINPVRKGNGVKPIKNSCMRHLHQKGWALEHPVRIKAEMRPGPLDAVKMIGGKAFALEWETGNISSSHRAINKMVMGMLERVIIGGVLILPSRDMYNYLTDRVGNFRELEPYFSVWRQFNLKDAYLAIVEIEHDSVDAQVSLIPKGTDGRAIR
OkrAI endonuclease F 194 Oceanobacter Kriegii , Synthetic Construct MKIKRIEVLINNGSVPGIPMILNEIQDAIKTVSWPEGNNSFVINPVRKGNGVKPIKNSCMRHLHQKGWALEHPVRIKAEMRPGPLDAVKMIGGKAFALEWETGNISSSHRAINKMVMGMLERVIIGGVLILPSRDMYNYLTDRVGNFRELEPYFSVWRQFNLKDAYLAIVEIEHDSVDAQVSLIPKGTDGRAIR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3') c 12 NA TATGGATCCATA
DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3') d 12 NA TATGGATCCATA
DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3') g 12 NA TATGGATCCATA
DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3') h 12 NA TATGGATCCATA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-08-11
Deposition Author(s): Aggarwal, A.K. , Vanamee, E.S.