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3NM9

Hmgd(m13a)-dna complex

PDB DOI: 10.2210/pdb3nm9/pdb

Classification: GENE REGULATION/DNA
Organism(s): Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2010-06-22
Deposition Author(s): Churchill, M.E.A. , Klass, J. , Zoetewey, D.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å

3nm9
Literature

Hmgd(m13a)-dna complex

Churchill, M.E.A. , Klass, J. , Zoetewey, D.L.

Primary Citation of Related Structures: 3NM9


Proteins
Molecule Chains Sequence Length Organism Sequence
High mobility group protein D A 73 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG
High mobility group protein D D 73 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG
High mobility group protein D G 73 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG
High mobility group protein D J 73 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG
High mobility group protein D M 73 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG
High mobility group protein D P 73 Murine Hepatitis Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' b 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' c 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' e 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' f 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' h 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' i 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' k 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' l 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' n 11 NA GGCGATATCGC
DNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3' o 11 NA GGCGATATCGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-06-22
Deposition Author(s): Churchill, M.E.A. , Klass, J. , Zoetewey, D.L.