3MXB
Molecular basis of engineered meganuclease targeting of the endogenous human rag1 locus
PDB DOI: 10.2210/pdb3mxb/pdb
Classification: HYDROLASE/DNA Organism(s): Chlamydomonas Reinhardtii , Synthetic Construct
Deposited: 2010-05-07 Deposition Author(s): Coloma, J. , Montoya, G. , Munoz, I.G. , Prieto, J. , Subramanian, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
Molecular basis of engineered meganuclease targeting of the endogenous human rag1 locus
Coloma, J. , Montoya, G. , Munoz, I.G. , Prieto, J. , Subramanian, S.
Primary Citation of Related Structures: 3MXB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| V3(E8K) | A | 175 | Chlamydomonas Reinhardtii , Synthetic Construct | MANTKYNKKFLLYLAGFVDGDGSIIAQINPNQSSKFKHRLRLTFYVTQKTQRRWFLDKLVDEIGVGYVRDSGSVSQYVLSEIKPLHNFLTQLQPFLKLKQKQANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLDSLSGKKKSSPAADWSHPQFEK |
| V3(E8K) | R | 175 | Chlamydomonas Reinhardtii , Synthetic Construct | MANTKYNKKFLLYLAGFVDGDGSIIAQINPNQSSKFKHRLRLTFYVTQKTQRRWFLDKLVDEIGVGYVRDSGSVSQYVLSEIKPLHNFLTQLQPFLKLKQKQANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLDSLSGKKKSSPAADWSHPQFEK |
| V2(K7E-G19S) | B | 173 | Chlamydomonas Reinhardtii , Synthetic Construct | MANTKYNEEFLLYLAGFVDSDGSIIAQIKPRQSNKFKHQLSLTFAVTQKTQRRWFLDKLVDEIGVGYVYDSGSVSDYRLSEIKPLHNFLTQLQPFLKLKQKQANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLDSLSEKKKSSPAADHHHHHH |
| V2(K7E-G19S) | S | 173 | Chlamydomonas Reinhardtii , Synthetic Construct | MANTKYNEEFLLYLAGFVDSDGSIIAQIKPRQSNKFKHQLSLTFAVTQKTQRRWFLDKLVDEIGVGYVYDSGSVSDYRLSEIKPLHNFLTQLQPFLKLKQKQANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLDSLSEKKKSSPAADHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*TP*TP*GP*TP*TP*CP*TP*CP*AP*GP*GP*TP*AP*CP*CP*TP*CP*AP*GP*CP*CP*AP*GP*A)-3') | c | 24 | NA | TTGTTCTCAGGTACCTCAGCCAGA |
| DNA (5'-D(*TP*TP*GP*TP*TP*CP*TP*CP*AP*GP*GP*TP*AP*CP*CP*TP*CP*AP*GP*CP*CP*AP*GP*A)-3') | t | 24 | NA | TTGTTCTCAGGTACCTCAGCCAGA |
| DNA (5'-D(*TP*CP*TP*GP*GP*CP*TP*GP*AP*GP*GP*TP*AP*CP*CP*TP*GP*AP*GP*AP*AP*CP*AP*A)-3') | e | 24 | NA | TCTGGCTGAGGTACCTGAGAACAA |
| DNA (5'-D(*TP*CP*TP*GP*GP*CP*TP*GP*AP*GP*GP*TP*AP*CP*CP*TP*GP*AP*GP*AP*AP*CP*AP*A)-3') | v | 24 | NA | TCTGGCTGAGGTACCTGAGAACAA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2010-05-07 Deposition Author(s): Coloma, J. , Montoya, G. , Munoz, I.G. , Prieto, J. , Subramanian, S.