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3MGT

Crystal structure of a h5-specific ctl epitope variant derived from h5n1 influenza virus in complex with hla-a*0201

PDB DOI: 10.2210/pdb3mgt/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2010-04-07
Deposition Author(s): Gao, F. , Kitamura, Y. , Liu, J. , Sun, Y. , Yang, M. , Zhou, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.197 Å

3mgt
Literature

Crystal structure of a h5-specific ctl epitope variant derived from h5n1 influenza virus in complex with hla-a*0201

Gao, F. , Kitamura, Y. , Liu, J. , Sun, Y. , Yang, M. , Zhou, J.

Primary Citation of Related Structures: 3MGT


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class I histocompatibility antigen, A-2 alpha chain A 275 Homo Sapiens , Synthetic Construct GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
HLA class I histocompatibility antigen, A-2 alpha chain D 275 Homo Sapiens , Synthetic Construct GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
HLA class I histocompatibility antigen, A-2 alpha chain G 275 Homo Sapiens , Synthetic Construct GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
HLA class I histocompatibility antigen, A-2 alpha chain J 275 Homo Sapiens , Synthetic Construct GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
Beta-2-microglobulin B 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin E 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin H 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin K 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
10-meric peptide from Hemagglutinin C 10 Homo Sapiens , Synthetic Construct KLYQNPTTYI
10-meric peptide from Hemagglutinin F 10 Homo Sapiens , Synthetic Construct KLYQNPTTYI
10-meric peptide from Hemagglutinin I 10 Homo Sapiens , Synthetic Construct KLYQNPTTYI
10-meric peptide from Hemagglutinin L 10 Homo Sapiens , Synthetic Construct KLYQNPTTYI
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-04-07
Deposition Author(s): Gao, F. , Kitamura, Y. , Liu, J. , Sun, Y. , Yang, M. , Zhou, J.