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3M9M

Crystal structure of dpo4 in complex with dna containing the major cisplatin lesion

PDB DOI: 10.2210/pdb3m9m/pdb

Classification: Transferase/DNA
Organism(s): Paramecium Tetraurelia Strain D4-2 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2010-03-22
Deposition Author(s): Ling, H. , Wong, J.H.Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

3m9m
Literature

Crystal structure of dpo4 in complex with dna containing the major cisplatin lesion

Ling, H. , Wong, J.H.Y.

Primary Citation of Related Structures: 3M9M


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV B 352 Paramecium Tetraurelia Strain D4-2 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*AP*AP*G)-3') p 13 NA GGGGGAAGGAAAG
DNA (5'-D(*TP*CP*TP*GP*GP*CP*TP*TP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') t 18 NA TCTGGCTTTCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-03-22
Deposition Author(s): Ling, H. , Wong, J.H.Y.