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3M8R

Crystal structure of the large fragment of dna polymerase i from thermus aquaticus in a closed ternary complex with trapped 4'-ethylated dttp

PDB DOI: 10.2210/pdb3m8r/pdb

Classification: Transferase/DNA
Organism(s): Thermus Aquaticus , Synthetic Construct

Deposited: 2010-03-19
Deposition Author(s): Betz, K. , Diederichs, K. , Marx, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

Literature

Crystal structure of the large fragment of dna polymerase i from thermus aquaticus in a closed ternary complex with trapped 4'-ethylated dttp

Betz, K. , Diederichs, K. , Marx, A.

Primary Citation of Related Structures: 3M8R


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase I, thermostable A 540 Thermus Aquaticus , Synthetic Construct ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3') b 12 NA GACCACGGCGCC
DNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') c 16 NA AAAAGGCGCCGTGGTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-03-19
Deposition Author(s): Betz, K. , Diederichs, K. , Marx, A.